FMO14154.5prime Sequence
942 bp (834 high quality bases) assembled on 2014-07-11
> FMO14154.5prime
TCAGTCGACATGGAACCCAAGAAGTTTCGGCTAGACCGTGGACCCTACCT
TTCCCAGCTGGACTACCAATCTCGTCTGCAGTTCCAAGCACCAGCTCTGA
GGTTACCCCTTACCAGCATTATATGCACCATTGGACCCTCATCCAGCCAG
CCCGAGGTTCTTCTTAATCTCATTCACGCTGGGATGAAGGTGGTCCGATT
GGACTTCTCCGACGGCACCCACGATTGCCATTGCCAGGCTATCCAGGCGG
CTCGTAAAGCCATCGCCATGTATGCGGAGGAAACGGGTCTTCCCAGGAGC
TTGGCCATTGCCCTGGACACCAAGGGTCCGGTAATCAATCCACAGGGTGT
AGCTGCTGATTTAAACGCCATAACCGAACAAGACAAACTGGATCTCAAGT
TTGGAGCGGATCAAAAGGTTGACATGATCTTCGCATCGTTCATCCGCGAT
GCCAAAGCTTTGAAAGAAATTCGCCAGGCACTGGGTGCCTGTCCATCAAG
TGAGCACATAAAGATCATTTCCAAGATCGAAAGTCAACAGGCTCTGGCGA
ACATAGATGAGATAATCCGCGAATCCGATGGCATAATGGTGGCCCTTGGG
AATATGGGCAACGAAATAGCACTGGAGGCTGTACCGCTGGCCCAGAAATC
GATTGTGGCCAAGTGCAACAAGGTTGGAAAGCCTGTGATCTGTGCCAATC
AAATGATGAATTCGATGATACCAAGCCACGTCCCACTCGCGCCGAATCCT
CTGATGTGCAACGCATCTTGGATGGTGTGATGCCCTTGTGTGTCAGATGA
ACGGCAGGTAGTACCGTGCATGTTGTGCAGTGCATGTCAGATATGCGCAA
GTCGAGTCGGTTTTATGGTACGAGAGCATTCGACCACTCAGAGCGGAGTC
GGATCAACGCCGCGATCCATTCTCCGCGGTTAGCACGCAATT
FMO14154.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:24:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7362-RB | 2654 | CG7362-RB | 145..1101 | 10..942 | 4060 | 96.6 | Plus |
| CG7069-RA | 2693 | CG7069-RA | 830..1223 | 390..784 | 675 | 79.6 | Plus |
| CG7069-RA | 2693 | CG7069-RA | 188..496 | 21..329 | 540 | 78.7 | Plus |
| PyK-RA | 2109 | CG7070-RA | 1200..1295 | 664..758 | 215 | 83.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14753460..14754255 | 801..12 | 3700 | 99.1 | Minus |
| 3R | 32079331 | 3R | 22373716..22374079 | 390..758 | 595 | 78.6 | Plus |
| 3R | 32079331 | 3R | 22373074..22373382 | 21..329 | 525 | 78 | Plus |
| 3R | 32079331 | 3R | 22371693..22371788 | 664..758 | 190 | 82.3 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:24:42 has no hits.
FMO14154.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:26 Download gff for
FMO14154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7362-RB | 139..1095 | 3..937 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:02:32 Download gff for
FMO14154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7362-RB | 139..1095 | 3..937 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:02:32 Download gff for
FMO14154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14753307..14754267 | 1..937 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:26 Download gff for
FMO14154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10579029..10579989 | 1..937 | 96 | | Minus |
