FMO14160.5prime Sequence
945 bp (855 high quality bases) assembled on 2014-07-11
> FMO14160.5prime
TCAGTCGACATGTGGATAACCGGTCAGTTTGTTTTTCTTCTGCTGGTGGC
ACTTGTTGCCGCAAAATCGAAAACCTCGGCGGTGCAGGATGACATCGCGG
AGTATAAGGACTTCAAGAAGCTGCTGCGCACCAAGAACAATGTCCTCGCG
CTCTACGTGACCAGTGCGAAATCCGCTGCTGCTGAGCTAAAGATATTCCG
TGAGGCGGCGGAGGCGATACGGGGAACCGGGACAATGTTGCTGCTAGATT
GCGGACAGCAGGATCGCAAGAAACTGTGCAAGAAGTTGAAGGTATCGCCG
GACCCCTACGCCATTAAACACTACAAGGATGGCGACTTCCACAAGGACTA
CGACCGGCAGCTGAGCGTCAGCTCCATGATCACTTTCATGCGTGATCCCT
CCGGCGATTTGCCCTGGGAGGAGGATCCAGCCGGCAAGGATGTCCTGCAC
TTCAGCGATGCCGCATCCTTCACAAAGCATTTACGCAAGGATATCCGGCC
CATGCTTGTCATGTTCTATGTTCCGTGGTGCGGATTCTGCAAGAAAATGA
AGCCGGAGTACGGAAAAGCGTCCACGGAGTTGAAAACTAAGGGCGGTTAT
ATTCTGGCGGCTATGAATGTAGAGCGACAGGAGAACGCTCCTATACGCAA
AATGTTCAACATAACTGGGTTTTCCCACCCTGATTTACTTTGAAAATGGC
AAGCTGCGCTTTACATACGAAGAGAGACACAAGGAGGCTTTGGTGTCTTT
ATGCTCAATCCAATGCCAAGCCAACGCCAAGCCCAGAACCCGATGGTCGG
CGATACCAACTCGAGATGTCATCTCACTCGCAGGTTTGAGCCCGCTCTGA
AGACGAAAGTCCGCCCTGTCATGTTCTATGCACCCTCGTGGCGACCCTGT
AAGGCATGAACCGGAATACGAAAGGCCGCTCTGGGATGATGCGAA
FMO14160.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:24:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9302-RA | 1972 | CG9302-RA | 182..1133 | 10..939 | 4065 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13377699..13378357 | 668..10 | 3250 | 99.5 | Minus |
| 2L | 23513712 | 2L | 13377363..13377651 | 934..668 | 370 | 88.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:24:19 has no hits.
FMO14160.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:16 Download gff for
FMO14160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9302-RA | 182..1054 | 10..865 | 97 | <- | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:02:10 Download gff for
FMO14160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9302-RA | 182..1054 | 10..865 | 97 | <- | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:02:10 Download gff for
FMO14160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13377703..13378357 | 10..664 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:16 Download gff for
FMO14160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13377703..13378357 | 10..664 | 99 | | Minus |
