FMO14173.5prime Sequence
998 bp (908 high quality bases) assembled on 2014-07-11
> FMO14173.5prime
TCAGTCGACATGAATGGGTCCTGGAAACTAATCCTGCCCGTGGGCTTTGT
GCTGTACTCGCTGCCACTTTTCCTGCGGGTGAATGGCACATCGGACTATG
TAATCGACGAGGAGTTCCACATTCCGCAGGGATTGGCCTTTTGCCGCAAG
GAATTCGATGTGTGGGATCCCAAGATAACAACATTTCCGGGCCTCTATCT
GATCGCCCTGCTCCTGAATCCCCTAAGTCTGTGCACGGTGACGGGCCTGA
GGATGCTCAGCCTAGCAGGTGCCGGCATCAATATTCTGCTGCTCTACAAG
ATCAGACGGCGCATCCTGGCCGGCTCGGGTGGCAACTCATATGCCGCCCA
TGAGGCTATCACCATGTCCGTGCTTCCGCCGCTCTACTTCTTTAGCCACC
TTTACTACACGGACACCTTGTCGCTGACCATGGTGCTTCTGTTCTACAAC
TATTGGCAGCAGGAGGCGCACCTGCCGGCGGCGGTCTTTGGGGCTGCCAG
TGTGCTTATGCGCCAGACGAATATCGTGTGGGTATGCATGGCCACCGGAA
TGACTGTGCTGGACACGTTGGTCAATCAATGCGCCCGCACTGGGCGCGTT
CCCAAGGAAAATGTTCGACTGATGGGCAAAGAGTTGTGGCTTCAACTCGT
TAGCAGCCCCCAATTGCTGTGCAATTGCATCCTGAGCATCTTGGCCAAGT
GCTGTTTCTACGCTTCGATCATTCTGCCGTTCGTGGGATTCCTCTTCATC
AATGGTTCCATTGTGGTGGGCGACAGAGTGCCCACGAGGCCAGTTTGCAT
GTGCCGCAGCTATTCTACTTCGCCATCTTTGCGGCTGGCTTTGGGATATC
CACACCATACGTCAGTTTCGTCCGGCAGCAGATTAATACGCAGGATCCGC
GTGCTGTCCTATTGGCATTGCTGCTCATACTGGTGGTGGGTGCACTAACC
CGAGATGCATCTTACCTGGCGGCGTGACACCAGAGACCTATAACATTC
FMO14173.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Alg10-RA | 1529 | CG32076-RA | 105..1098 | 9..998 | 4555 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11165285..11165763 | 162..640 | 2365 | 99.6 | Plus |
| 3L | 28110227 | 3L | 11165819..11166130 | 632..939 | 1330 | 98.1 | Plus |
| 3L | 28110227 | 3L | 11165075..11165228 | 9..162 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:25:42 has no hits.
FMO14173.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:51 Download gff for
FMO14173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alg10-RA | 97..1055 | 1..953 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:03:41 Download gff for
FMO14173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alg10-RA | 97..1055 | 1..953 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:03:41 Download gff for
FMO14173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11165067..11165228 | 1..162 | 97 | -> | Plus |
| 3L | 11165286..11165756 | 163..633 | 100 | -> | Plus |
| 3L | 11165821..11166159 | 634..965 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:51 Download gff for
FMO14173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11158167..11158328 | 1..162 | 97 | -> | Plus |
| arm_3L | 11158386..11158856 | 163..633 | 100 | -> | Plus |
| arm_3L | 11158921..11159259 | 634..965 | 95 | -> | Plus |
