FMO14174.5prime Sequence
1020 bp (931 high quality bases) assembled on 2014-07-11
> FMO14174.5prime
TCAGTCGACATGAATAAGGCATCCCGAATTTTCTGTCCAGCCTTGATCAC
ACCCAAAAATGCGGTGGTCAAGCAAACGGAGCAACTGTCGCGCAGCCAAA
AGCTGCTGACAGAACTTGGCTTGGTTAAATCGGGCAGCAATGGCACCTAC
CAAATAATGCCCATGGCCCAGCGATCGGTAGACAAGTGCATTGACTTGGT
CCAAAGCAACATGCAACAGGCTGGTGGGCAGAAGATCACCCTGCCCATCC
TGACGCCCACAGGACTTTGGAAGAAGACGGGGCGACTGGACGGCGATATA
TCCGAGTTCTACATGGTGCGGGATCGCAGCGGCAAGCAGTTCCTCATGAG
TCCAACCCACGAGGAGGCAGTGACTGCCATGCTGGCCACCACCTCACCTA
TTTCCTATCGGCAGCTGCCCTTGAGACTCTTCCAAATCGGTCCCAAGTTC
AGGGATGAGCTTAAGACTCGATTTGGTTTGATGCGAGCCAAGGAATTCCT
AATGAAGGACATGTATTCCTTTGATGTCAGCGAAGAAACAGCCATGGAAA
CTTACACACTAGTTAATGCTGCATACGATAGGTTGTTCAAACAGCTGGAG
GTTCCTTTCGTTAAGGTGAATGCCGCCACTGGCATAATGGGTGGCAGTGT
ATCCCACGAATACCATTATGTATCGCCCGTGGGCGAGGACAACCTACTGC
AGTGCAGTTCCTGCGGCTTTGCTGGCAACTCTGAGTTGTAAAGGCCCCAG
CTAGCTGCCCGAGCTGTAACAGCTCGGATTTGAAAGAAGTTCGAGGAGTT
GAGTGGCCCACACCTTCCTGTTGGGGGACAGTACTCCAACCCTTGGGCGC
CACATTTCTCACACCCACTGGGAGCCGCAATCGTGGTCATGGGATGTTAT
GGCATTGGCATCACCTAGGTATGCTGCCGCTCTGGGAAGTCCTCTCCTCG
ACCACCGACTCGGTTGGTCAAGCTCTAGCACCCTACGATGTGTGTTTATA
GACCCAGCAGAGCAGGACAG
FMO14174.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-RA | 1509 | CG12186-RA | 101..1101 | 8..998 | 4435 | 97.1 | Plus |
| Aats-pro-RB | 1517 | CG12186-RB | 101..1109 | 8..998 | 4345 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2651019..2651280 | 616..355 | 1310 | 100 | Minus |
| 3L | 28110227 | 3L | 2651342..2651595 | 354..101 | 1240 | 99.2 | Minus |
| 3L | 28110227 | 3L | 2650569..2650961 | 998..616 | 1165 | 92.9 | Minus |
| 3L | 28110227 | 3L | 2651656..2651750 | 102..8 | 445 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:25:46 has no hits.
FMO14174.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:53 Download gff for
FMO14174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-pro-RA | 101..1117 | 8..1012 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:03:43 Download gff for
FMO14174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-pro-RA | 101..1117 | 8..1012 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:03:43 Download gff for
FMO14174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2651019..2651280 | 355..616 | 100 | <- | Minus |
| 3L | 2651342..2651593 | 103..354 | 99 | <- | Minus |
| 3L | 2650553..2650960 | 617..1012 | 92 | <- | Minus |
| 3L | 2651656..2651750 | 8..102 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:53 Download gff for
FMO14174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2650553..2650960 | 617..1012 | 92 | <- | Minus |
| arm_3L | 2651019..2651280 | 355..616 | 100 | <- | Minus |
| arm_3L | 2651342..2651593 | 103..354 | 99 | <- | Minus |
| arm_3L | 2651656..2651750 | 8..102 | 97 | | Minus |
