FMO14178.5prime Sequence
1011 bp (920 high quality bases) assembled on 2014-07-11
> FMO14178.5prime
TCAGTCGACATGCTGGAGCGGATCGATGAGCAAACGGCTGCCATGTCGCA
GCGGAGCGAGCGGCTTAAAATGATGAAGCTGCAATACCAAATGTACTTTG
CGAAATTGGTGCAGAATCAAACATTGCGATGCATCCAGCAGACGACGACA
TCGACATCGGCTCCATCCGCCGGCGGAGTGATACCAGTGCTGGTGCAACC
GCAGCCGCAGGTGACGGTGACCAATCCGCAGTCGACGCCACAGAACTGGA
CGTTTGCCATGGCCACGCCCACGCAGGCGGGCATGCTTTTGACGCCCCAG
TTTGCCGCAGCATCTCCTGCAGGTCCGCCCATGCAGCCGCCAACCATGCC
GGCTGGCCATCCTGTTTACTATCCAGAGCTCTTTGCCGGAACTACAGCTC
CCCTCGGCACCTCGAACCTATTCGATTTGCGCGCCACCCTGCGCGCCTTT
GATAATGAGAATGCCGATTTACCGGAGCGCATGCAGCCCCACTTGACAGG
TGATTATCAGGCGGAGCTGGGTGGCAGGAGCCAACCTTCAGCAAGCGCAG
CAGCAGGTCCAGCTGCTGCGACACCCACATCGACTTTGTCCAGCCAGGAG
AAGGGTGCGCAGCAACTGAGCAGCACTTCCTCCACGCTGGCCACATCCTC
GCTGACATTTGATAAATTGCCAAAGACATCGTCGCCTTCGCTGACGTTAA
CTGAGCTGCCGACTGCAGGAGTAGCAACTCCTGTCATGATGTGGGCGGGC
AACCGCAAGGGATGCCGCCGACCTGGATGGCTGGACAAATTCACGCGTGA
CTAAAGTCGAGTATGAAAATCACCAACTGTCGTTGGGCCATAATGAGCCG
GGCCAGGAAAAGCAGACACTACGCGAGCAGCAGCATCATGGAGCCGCAGC
AACAGCATCAGCAGCCATCCCCCCGACTTGAAGCCATAACTTTTGGTGGG
AGCTGAAAAATCGATGAAGTCCTCCTGGGGGAGTGGCGAACCAATGCAAC
TCTCGACCAAG
FMO14178.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12885-RB | 3026 | CG12885-RB | 302..1284 | 4..992 | 4520 | 97.9 | Plus |
| CG12885-RA | 3015 | CG12885-RA | 291..1273 | 4..992 | 4520 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27531283..27532128 | 77..921 | 3975 | 99.3 | Plus |
| 3R | 32079331 | 3R | 27531011..27531085 | 4..78 | 360 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:25:57 has no hits.
FMO14178.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:57 Download gff for
FMO14178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12885-RA | 289..1228 | 1..942 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:03:53 Download gff for
FMO14178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12885-RA | 289..1228 | 1..942 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:03:53 Download gff for
FMO14178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27531009..27531085 | 1..78 | 96 | -> | Plus |
| 3R | 27531285..27532132 | 79..927 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:57 Download gff for
FMO14178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23356731..23356807 | 1..78 | 96 | -> | Plus |
| arm_3R | 23357007..23357854 | 79..927 | 98 | <- | Plus |
