FMO14179.5prime Sequence
946 bp (827 high quality bases) assembled on 2014-07-11
> FMO14179.5prime
TCAGTCGACATGCTGTTACATTTAAAACTCCGGCTTGAACTTCAATTACT
AGGCCGCTGTGCGCAGCTAGTAATCAATCGCCATGCCAGCAAAGGAAATG
TGGACAAGGAGGTGATGGAGCAAATGGAGAAGGGCTACAAGAAGTTGGCC
GAGTCGAAATCCAAGTCCCTGCTGAAGAAGCATCTCACCAAGGAGATCTT
CGAGAAGCTAAAGACGAAGACTACACCCTCGTTCAACTCCACACTGCTGC
ACTGCATCAGTTCGGGAATGTGCAATCATGACTCCGGCGTTGGGCTCTAC
GCCCCCGATCCGGAGGCATATAAGGTGTTTGCCGATCTCTTTGATCCCGT
CATCGAGGAATACCATAAGTGCTTCAAGAAGACGGACAAACAGCCGGCGA
CTGCTTTCGGCAAAGGCGCGGATTTTGAAAACCTAGATCCCGATGGCCAT
TTCATCGTATCCACGCGTGTCCGTTGCGGAAGAGCCGTCAAAGGATACCC
CTTCAATCCCTGCTTAACGGAGGCTGACTACATGGAGCTGGAGAGTAAGA
TTTGTGGGGCAGTGACTAGCCTCACCGGAGAGTACAAGGGTAAATACATG
CCATTGACTGGAATGGATAAATGCATACAGGAGCAGCTCATAGAGGATCA
CTATCTGTTCAAGGAGGGCGATCGATTTCTGGCTTCCGCTGGAGCCTCTC
GATATTGGCCAACGGGAAGGGGCATCTTTCTGAATAGCGCCAAGAACTTT
CTGGTCTGTGCAACGAGGAGGACCACATACGCATCATCTCGATGAGAAGG
TGCGACCTGGCAAGTCTACGATCGCATGTTGCGCGTGAGCTCTCGCAGCA
GCTGCAATCAACAGGATGACGACTGCCTTTTACTCTGTCCCACATCTGGA
CTTCTATCCGGCCCTCGGTGCCATCAGCTGCCATCTAATGTGTGAT
FMO14179.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5144-RA | 1286 | CG5144-RA | 58..1023 | 10..946 | 4095 | 96.6 | Plus |
| Argk-RG | 2110 | CG32031-RG | 707..945 | 160..398 | 295 | 76.4 | Plus |
| Argk-RH | 1576 | CG32031-RH | 74..312 | 160..398 | 295 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9047496..9048281 | 10..794 | 3880 | 99.9 | Plus |
| 3L | 28110227 | 3L | 9050045..9050283 | 398..160 | 295 | 74.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:26:01 has no hits.
FMO14179.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:59 Download gff for
FMO14179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5144-RA | 58..946 | 10..881 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:03:57 Download gff for
FMO14179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5144-RA | 58..946 | 10..881 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:03:57 Download gff for
FMO14179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9047496..9048384 | 10..881 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:59 Download gff for
FMO14179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9040596..9041484 | 10..881 | 97 | | Plus |
