FMO14180.5prime Sequence
974 bp (873 high quality bases) assembled on 2014-07-11
> FMO14180.5prime
TCAGTCGACATGCAGCAAGGCGAACTCCGGCGCAAAAAAACAACAACAAT
TGCTGACATGTGCAACGTAGCATGCAAAACGGGGATTTTCCGGAACTACT
TGCGGGCAAGTGGCCAAAGGACCTGGATGTCGGTGCTCCTGGTGCTCGTC
CTTATGGGTACCTTCACAGCCGCGGAACCCCTGAAAGTTATATACGCGGT
CAACGCTGGCGGAGATGAGCACACCGATCTTAACGGGGTCCAATACGATG
CGGATCCTCTCAAAGGAGTTGGAATAGCTTCGGACTACGGCAAACACCTG
CTGATGATCGGCCGGGTACAGGAACATGACGAGGTGCTCTACAGGACCGA
GCGGTATCACACCACTACATTTGGGTACGATTTACCAAGCGATGGCGATG
GAGATTACGCCTTGATAATGAAGTTCTGTGAGGTATACTTTGATGCGCCG
CAGAAGAAGGTTTTCGATGTGCTCCTAAACCGCAAGCACACGGTTGTCCG
CCAGCTGGACATCTACAACGAGGTGGGCAGGGGCTCGGCACACGACGAGA
TTGTGTACTTTAAGATCAACAACGGACGATTAAACTATGAAGGCGAGGTG
TCCGATGTGCGAAATGGCCGCCTCCGGCTGGACTTTATAAAGGGGGCACT
GGATAATCCCAAGATCAATGCATTCGCCCTGCTCAAGGGAGATATCTCCC
AGGTGCCACGAATGCATGGTACCGAGGCGACTGAGAGGATTAAACCGGAG
GGTAAGCTGACGCGGACAGAGAAGCTCAGCAGTAGAGAGGGTGGTGCGCA
CAGCGGACGACATTGATGAGATGACGAGGACCTGACGACGAGAGTTGAAG
AGGAGCTTTCGAGCAGAATGTCGACAGCTGGGCAGCGATCAGCGTCGCTT
GCATCGGAACACAAGCGTCTACATTGGTCCCGCCCACCGAATCATACTCA
TGGACGAACATCGATCTTGCCTAC
FMO14180.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9257-RA | 1579 | CG9257-RA | 141..1122 | 10..970 | 4245 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21102883..21103780 | 10..893 | 3845 | 98.3 | Plus |
Blast to na_te.dros performed 2014-11-29 00:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rt1c | 5443 | Rt1c RT1C 5443bp | 1401..1438 | 630..593 | 109 | 76.3 | Minus |
FMO14180.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:38:00 Download gff for
FMO14180.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9257-RA | 132..1038 | 1..893 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:04:01 Download gff for
FMO14180.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9257-RA | 132..1038 | 1..893 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:01 Download gff for
FMO14180.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21102874..21103780 | 1..893 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:38:00 Download gff for
FMO14180.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21102874..21103780 | 1..893 | 97 | == | Plus |
