FMO14182.5prime Sequence
919 bp (817 high quality bases) assembled on 2014-07-11
> FMO14182.5prime
TCAGTCGACATGGTCGTCGTCTCCGACAGCCGCGTCCGTTTGCCGCGTTA
CGGCGGAGTCAGCGTCAAACGGAAAACGCTAAATGTGCGCGTCACGACAA
TGGACGCGGAACTGGAGTTCGCCATTCAGTCGACGACGACGGGCAAGCAA
TTGTTTGACCAGGTGGTGAAGACGATCGGCCTGCGAGAGGTTTGGTTCTT
TGGACTCCAGTACACCGACTCCAAGGGCGACTCCACATGGATCAAGCTGT
ACAAAAAGCCCGAATCGCCGGCCATAAAGACAATAAAATATTTAAAGCGT
GTAAAGAAGTATGTGGACAAAAAGACAGCCGACAGCAATGGAGTAAATCA
TTTAGAGACGAGCGAAGAGGATGACGACGCCGATGATATGACTGGATCAA
TGCCGTTTTCGACATGGGTGATGAACCAGGACGTGAAGAAGGAGAATCCC
TTGCAGTTTAGGTTCCGTGCCAAATTCTATCCCGAGGATGTGGCCGAGGA
GCTGATCCAGGACATTACACTGCGTCTGTTCTACCTGCAGGTGAAGAATG
CCATACTGACCGACGAGATCTATTGTCCGCCAGAGACATCCGTGCTGCTC
GCCTCGTACGCCGTCCAGGCGCGTCATGGTGACCACAATAAGACCACCCA
CACAGCCGGCTTTCTGGCCAACGATCGCCTGCTGCCGCAGCGCGTCATCG
ACCAGCACAAGATGTCCAAGGACGAGTGGGAGCAGTCGATTATGACCTGT
GCAGAGCATCGCAGCATGCTGCGCGAGATGCCATGATGAGTATCTGAGAT
CGCCCAGACTGAGATGTACGCGTTACTACTTGAGATCGCACAAGAAGGCA
CGATCTTGCCTGGGCGTAACCGCCACTGGGTCTGAAATTACGAGACAGAA
CGAATAGGTTGAACGCCGA
FMO14182.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Moe-RK | 3064 | CG10701-RK | 189..1113 | 10..919 | 4010 | 97.1 | Plus |
| Moe-RB | 2462 | CG10701-RB | 189..1113 | 10..919 | 4010 | 97.1 | Plus |
| Moe-RA | 2353 | CG10701-RA | 149..1004 | 79..919 | 3665 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:25:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8875486..8875861 | 788..417 | 1700 | 98.7 | Minus |
| X | 23542271 | X | 8876573..8876753 | 258..78 | 905 | 100 | Minus |
| X | 23542271 | X | 8876306..8876439 | 390..257 | 670 | 100 | Minus |
| X | 23542271 | X | 8878469..8878537 | 78..10 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:25:31 has no hits.
FMO14182.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:47 Download gff for
FMO14182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Moe-RB | 195..1113 | 10..912 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:03:29 Download gff for
FMO14182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Moe-RB | 189..1107 | 10..912 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:03:29 Download gff for
FMO14182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8875350..8875860 | 418..912 | 94 | <- | Minus |
| X | 8876033..8876059 | 391..417 | 100 | <- | Minus |
| X | 8876306..8876437 | 259..390 | 100 | <- | Minus |
| X | 8876573..8876752 | 79..258 | 100 | <- | Minus |
| X | 8878469..8878537 | 10..78 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:47 Download gff for
FMO14182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8769383..8769893 | 418..912 | 94 | <- | Minus |
| arm_X | 8770066..8770092 | 391..417 | 100 | <- | Minus |
| arm_X | 8770339..8770470 | 259..390 | 100 | <- | Minus |
| arm_X | 8770606..8770785 | 79..258 | 100 | <- | Minus |
| arm_X | 8772502..8772570 | 10..78 | 100 | | Minus |
