FMO14184.5prime Sequence
996 bp (909 high quality bases) assembled on 2014-07-11
> FMO14184.5prime
TCAGTCGACATGTGGCTGACCTTGATCACGGGAGCTCTGATCTTGCTCCT
CACCTGGGACTTTGGACGCAAGCGCCAACGAGTCCTCGCCTTTGAGAAGT
CCGCGATCCCAGGTCCCATTTCCATTCCGATCCTGGGCTGTGGTCTCCAG
GCTCTGCACTTGGGAGCAGAGAACATTATCGGATGGGTGGGAGAAAAGTT
CGACAAGTATGGCAAGACCTTTCGTTTTTGGATATTGGGGGAGTCCCTGA
TCTACACGAAGGACCTGCAGTACTTTGAGACCATCTTGAGTAGCACCACT
CTCCTGGAAAAGGGTCAACTCTACGAGTATCTGCGACCTTTCCTAAACGA
CGGCCTGCTTGTCAGCACGGGTCGAAAATGGCACGCCAGAAGGAAGATTT
TCACACACGCATTCCACTTCAAAGTCCTTGAACACTATGTGGAGATCATG
GATCGACATAGTAGCGTCATGGTGGATAATCTGCGAAAGGTGGCCGATGG
TAAGACAGCGGTGGATATGCTCAAGTATGTGTCGCTGGCAGCTCTTGACG
TGATAACAGAGGCTGCCATGGGTGTACAGGTGAATGCCCAGAACGACCCC
GATTTTCCCTACATCAAGGCGCTGAAAAGTGTGGTCTATATCCAACCGGA
TCGCATGTTCAGGTTCTCGAGGCGCTACAACTGGCTGTTCCCGCTGGCGG
CACCTTTGCTGCACCGGCAACTGCTGAGCGATATCCGCGTCATGCACGAC
TTCACCGACAAGGTCATCAGCGAGCGGCGAGAAACCGTGCGGCGGGCTAA
GCCGACGGCACCTATCGACCGCTGAGTCTGGGTGATGCCGAGATCGGTAG
CAAGTCGCAGATGGCTCTGCTTGGACATTCCTGCTGCAGTCGAGCATCAA
CAATCAGCCCTGGTCCGATGCGGATATATACCCGGAGAAGGGCGAGACCC
TTTATGTTTGTGAGGGCGACGACACCCACCCGCATGGTGTGTGTTC
FMO14184.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4d20-RA | 1817 | CG16761-RA | 140..1116 | 9..992 | 4555 | 98.1 | Plus |
| Cyp4d21-RA | 1821 | CG6730-RA | 281..781 | 208..708 | 360 | 72.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2477690..2478076 | 559..173 | 1935 | 100 | Minus |
| 3L | 28110227 | 3L | 2477183..2477383 | 827..628 | 955 | 99.5 | Minus |
| 3L | 28110227 | 3L | 2478146..2478309 | 172..9 | 820 | 100 | Minus |
| 3L | 28110227 | 3L | 2477018..2477118 | 928..826 | 385 | 96.1 | Minus |
| 3L | 28110227 | 3L | 2477444..2477516 | 629..557 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:25:39 has no hits.
FMO14184.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:50 Download gff for
FMO14184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4d20-RA | 131..1116 | 1..992 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:03:38 Download gff for
FMO14184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4d20-RA | 131..1116 | 1..992 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:03:38 Download gff for
FMO14184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2477690..2478076 | 173..559 | 100 | <- | Minus |
| 3L | 2478146..2478314 | 1..172 | 97 | | Minus |
| 3L | 2477185..2477381 | 630..825 | 99 | <- | Minus |
| 3L | 2477444..2477513 | 560..629 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:50 Download gff for
FMO14184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2477185..2477381 | 630..825 | 99 | <- | Minus |
| arm_3L | 2477444..2477513 | 560..629 | 100 | <- | Minus |
| arm_3L | 2477690..2478076 | 173..559 | 100 | <- | Minus |
| arm_3L | 2478146..2478314 | 1..172 | 97 | | Minus |
