FMO14187.5prime Sequence
992 bp (905 high quality bases) assembled on 2014-07-11
> FMO14187.5prime
TCAGTCGACATGTACGTGTCCAAATTTGAGGCGAGCATGGCTACGAATTT
TGTTATTTATCTGGCGCTTGGGGCACTCCTCTGCCTGGCCACTGCCAACG
GGGAAATAGTGAACACAAATGTGGAGCGAACGCTGGACCTAACATCGCAG
CTGGTAAAGACGACCACCAAGATCTCGGCGGAAGATTCGGCCGGCAAGCC
GATTGTGGAATACGTGTTTTTCACATCGGAGCCCAGTTTGGCGTACATTG
ACGTAAAAGATGCTAGCGACAAGAGTGTGCCATTCAAGCGGAATGAGCCC
GTGAAGGGGGAGCAGAGCTTCACGTTCACCTTCCCCAGGGCCGCCGCCAA
GCAGACGTTCATCGTCGAGACCGTGGCCTCTAAGGGCATCCGCCCACATC
CGGAGGAGATACGGCAGAACGACAAGCAGTTCGTGAAATATACGGGCAAT
CTGCACCTCTATTCCAAGTACAGGACCAACAGCCAGAAGACCAATGTCAA
GCTCAGCTCCTCGAACATCTTGTCGCACACCCAGGTCAAACCCTTTTCGG
TGTCCTCCAACAAGATCACCCTGGGACCCTACGAAAACGTAGAGGCCTTC
AGCCAGGAGCCACTAGTCATCCACTATGAGAACTCCGCACCATTCGTCAC
CGTCAATACGCTGGAACGCACGCTGGAGATATCGCATTGGGGCAACATTG
CCGTCCAGGAGTCTATTCAGATGACGCACACCGGGGCCAAGCTGAAGGGC
TCGTTCTCGCGCTACGATTTCCAGAAGAAGGACGCTCCGGACTGGCGGCC
CTCAAGTCGTACAGACCTACCTGCCAGCATCGCATCTGGTGTCTATTACC
GCGACACCAATGGCAACATTTCCACCTCCAACATGAACGCCGTGCGCGAC
TTCATCGAGCTGGAGCTGCGTCCGCGCTTCCCGCTCTTCGCGGCTGGAAA
AAGCAAATAACTCTGGCTACAATGGTGCTCGTCTCGAGTCAT
FMO14187.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33303-RB | 2333 | CG33303-RB | 25..994 | 10..974 | 4665 | 99.2 | Plus |
| CG33303-RA | 1516 | CG33303-RA | 25..994 | 10..974 | 4665 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10375148..10375733 | 595..10 | 2930 | 100 | Minus |
| 2L | 23513712 | 2L | 10374717..10375092 | 966..595 | 1620 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:26:31 has no hits.
FMO14187.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:38:11 Download gff for
FMO14187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33303-RA | 21..1002 | 5..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:04:32 Download gff for
FMO14187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33303-RA | 21..1002 | 5..986 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:32 Download gff for
FMO14187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10374700..10375091 | 596..986 | 96 | <- | Minus |
| 2L | 10375148..10375737 | 5..595 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:38:11 Download gff for
FMO14187.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10374700..10375091 | 596..986 | 96 | <- | Minus |
| arm_2L | 10375148..10375737 | 5..595 | 99 | | Minus |
