FMO14189.5prime Sequence
959 bp (870 high quality bases) assembled on 2014-07-11
> FMO14189.5prime
TCAGTCGACATGAGCACATTGGCACTGGTGGCTTTCGTCCTTTGGGCAGC
TTTTCTACGCTACCTACCCAAGATTCTGAATTTTCTGAGACTTCAGAGAT
TTGCGAAAACTCTGCCGGGTCCCACGATTGGCGAACTGATTGCCAATGTT
AAGAAAGGCGAGATCCTTAACTGGCTAAAGGAACTGAGGGAGAAGCATGG
TCCGGTATTCCGCATCTGGTTTGGCAAGGATCTGATGGTTATGTTCACGG
ATCCGGAGGACATTAAGCAGCTGCTCGGCAACAATCAGTTGCTGACCAAG
TCGCGAAACTACGAGCTGCTCGAGCCCTGGCTGGGCAAGGGTCTGCTCAC
GAATGGCGGCGAGTCCTGGCATCGTCGCCGAAAGCTCCTCACTCCGGGCT
TCCATTTCCGCATCCTTAGCGAGTTCAAGGAGCCAATGGAGGAGAATTGC
CGCATCCTGGTGCGTCGTCTGAGGACCAAGGCCAATGGCGAATCCTTCGA
CATCTATCCTTATATTACCCTATTCGCCCTGGACGCCATCTGCGAAACGG
CCATGGGCATCAAGAAGCACGCCCAGCTGCAGAGCGACTCCGAATATGTG
CAGGCTGTTCAATCTATTTGCCGTGTGATGCACAAGCAGAGCTTCTCCTT
CTGGCAGCGACTCAACGTGTTCTTTAAGCACACAAAGCCCGGAAAGGAAC
GGGAGGCAGCTCTAAAGGTGCTCCACGACGAGACCAATCGGGTGATCCGG
CTGCGTCGTGAGCAGCTCATCCAGGAGCGCAACGAATGTAAACCAGAGCG
GAGCAGACGATGTGGGCGCCAAGCGCGACTGCTTCTCGACATGCTGCTGC
TCACCAATGAGGGCGGTGCGAGCTGACGATACCGATATTCGCGAGATGGA
CCCTTCATGTTCGAGGGTCCGAACCCACCAGTCGGCATCGCTTTGGACCT
GATTGTCTG
FMO14189.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4s3-RA | 2288 | CG9081-RA | 167..1123 | 6..944 | 4305 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15115472..15115926 | 614..160 | 2275 | 100 | Minus |
| X | 23542271 | X | 15115114..15115404 | 894..615 | 970 | 94.5 | Minus |
| X | 23542271 | X | 15116222..15116376 | 160..6 | 760 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:26:37 has no hits.
FMO14189.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:38:15 Download gff for
FMO14189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4s3-RA | 160..1123 | 1..944 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:04:39 Download gff for
FMO14189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4s3-RA | 160..1123 | 1..944 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:39 Download gff for
FMO14189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15116222..15116379 | 1..160 | 97 | | Minus |
| X | 15115472..15115925 | 161..614 | 100 | <- | Minus |
| X | 15115057..15115404 | 615..944 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:38:15 Download gff for
FMO14189.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15010255..15010412 | 1..160 | 97 | | Minus |
| arm_X | 15009505..15009958 | 161..614 | 100 | <- | Minus |
| arm_X | 15009090..15009437 | 615..944 | 93 | <- | Minus |
