FMO14193.5prime Sequence
977 bp (890 high quality bases) assembled on 2014-07-11
> FMO14193.5prime
TCAGTCGACATGTGCGCTATGGTAATGCAGTTGGACACCAAGGTTCGCAT
GGTCACATCCTCCTCCAACGACAACAGTGGTAGCGGCGGCGCCAGTGGCG
GTACAAGCGGAGCGGGCGGAGGAAACGGCGGTGGCGGTGTGGTTTCGGTG
CCCGTATCCCTGCCCATCGGTTCGATGATAACCGGCACTACCTTCAATGT
GATCACGCCCGACCAGCTGCCCCCTCACTTCAAGCCGATGCTGTGCGTCG
ACAACAATGGCTACCTGTCCGGCAGCACGGTCAGCATGGGCAACGACCTC
AAGACGATCGTCATCCAGCAACAGCAGACGCAACCAGGCGGCGGCGGTGG
CGGCGCCAATAATGCGGGCACCAATACGACCGCCACAAATACGATTGGAC
TGAATCACGATGGCTCCGGGAGCAACAATAGCCACGACAGCCTGGCCACC
TTGGAGCACGCCGCGGGCGGAGCGAGTGGCGTCGGCGGTGGCGGCGGCGG
AACGGGTGGTGGCTCCTCGGGATGGTCGGAGAACCCGTCAACCCAGCACA
ATGAGGTCTTCCAGATCCGCTGCAAAACCACCTGCGCCGAGTTATACCGC
AGCAAGCTGGGCTCCGGCGGCCGTGGACGCTGTGTGAAGTACAAGGACAA
GTGGCATACGCCCAGTGAGTTTGAGCATGTGTGTGGGCCGGGGCTCCAGC
AAGGATTGGAAGCGTTCGATCAAGTACGGCGGCAAATCGCTGCAGTCCCT
CATCGATGAGGGTACGCTCACGCCGCACGCGACCAACTGCAGCTGCACGT
CTGCTGCGACGACGAGCAGTGAGTCAGCTTCTGTCTGTCGTCTCTTTACA
CCGTACAGCGGCGGGAGGCGGATCAACTGATCTCGATATGGAGTCTGGAG
CCCACGCAGGCGTTACACCCATCCTAGTAACAACACCACGGTAAACCATT
ACATCAACCGAGCGGGAGCGGGCCAAA
FMO14193.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Deaf1-RC | 2042 | CG8567-RC | 90..1069 | 10..976 | 4315 | 97 | Plus |
| Deaf1-RE | 2033 | CG8567-RE | 90..1060 | 10..976 | 4230 | 96.5 | Plus |
| Deaf1-RD | 3588 | CG8567-RD | 491..1452 | 28..976 | 4225 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19819191..19819996 | 10..815 | 3935 | 99.8 | Plus |
| 3L | 28110227 | 3L | 19828331..19828430 | 839..935 | 215 | 88 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:26:50 has no hits.
FMO14193.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:38:19 Download gff for
FMO14193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Deaf1-RC | 90..1067 | 10..974 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:04:46 Download gff for
FMO14193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Deaf1-RC | 90..1067 | 10..974 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:46 Download gff for
FMO14193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19819191..19820010 | 10..827 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:38:19 Download gff for
FMO14193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19812291..19813110 | 10..827 | 99 | -> | Plus |
