Clone FMO14196 Report

Search the DGRC for FMO14196

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:141
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14442-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14196.5prime Sequence

961 bp (872 high quality bases) assembled on 2014-07-11

> FMO14196.5prime
TCAGTCGACATGGAACCAGATCCCAATGGGATAAAAATAGAGCCCTCACT
TGATCAGCAGCAGTACGCCACCCATGTGCTGGCCATCAATGGCTCCAATG
CCCGCCTGCTCATCGAGCATCCCTCAGCTTTGTTGGTACCACTCTCCTCG
CATCACCAGCTGCAATTGCAACAGCAGCAACAACAGCAGCAGCACGTACA
GCAGCAACATCAACAACAGCAGCAGCAGCATCAGCAACAACAGCAACAGT
TCCAGCAGCAACATCTTCACCAGCAGCAACAGGATCAACTGCAGTTCCAG
CAACAGCATCTCCAGCTTTATGCACCACTGAAGCAACAGCAATTGCAGCA
GCAGCAATCGCAGCAGCCACCCACTCCATTGGGACCCACCAGCAGTGCCA
GTTCCGCATCCATAACAGGTGCCTCCACCACTGGCCACCAGCAGAGGTGG
AACGAGAGCCCCGAGGCACGCCAGCGCCGTCTGGCCAGAAATGCTGAAAG
GATGCGGGAACGCCGGCAGCGCGAGAGCGAGGAGGAGTATCGCAAGCGAC
TACTCCGGAATGCAGAAGCCAATCGCCAGAGACGCCAGAATGAATCCGAC
ATAGAGCGGGCCATGCGGCTAGTGAGGAATGCGGCCAGGCAACGGCTACG
CCGGGCCATGGAGTCGCCGGACCAGAGGGCCAAACGGCTGGGCCAAATTG
GCCGAAAGGATGCGCATGTATCGCGCCAGCGAGACGAACGATCAGCGAAA
GCTCCGGCTGGCAGAATGGCGGCAGGGCGCGCCAAGGATCGCCAATGAGT
CACCGGAGGAGCGGAGGAAAGACTGAGAAAGCTGACGATTATGCCAAAAA
GGTCAGAGAAAAGAAAACGTACTGAGCATGTTGTGGTGCACGGGGTTCGT
CGTCGTGTCGTCTCAACGCCGACATTCCTCCCTCGTCGGTCACGGACAGC
AGTCTCCACCT

FMO14196.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14442-RD 2983 CG14442-RD 1052..2002 10..952 4360 98.2 Plus
CG14442-RC 4562 CG14442-RC 1052..2002 10..952 4360 98.2 Plus
CG14442-RA 4658 CG14442-RA 1046..1996 10..952 4360 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6693032..6693956 925..10 4085 98.6 Minus
3L 28110227 3L 14027696..14027803 281..174 210 79.6 Minus
Blast to na_te.dros performed 2014-11-29 00:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..7194 150..601 454 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6887 203..370 363 68.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2434..2679 152..391 344 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6898 227..418 336 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2260..2534 173..444 286 60.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6938 244..475 273 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2525 253..464 268 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2619..2835 154..370 247 62.1 Plus
roo 9092 roo DM_ROO 9092bp 1059..1181 218..344 238 67.7 Plus
roo 9092 roo DM_ROO 9092bp 1055..1147 265..357 195 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2449 276..417 192 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1589 232..303 189 73.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6877 292..444 178 61.6 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3192..3342 173..340 144 60.4 Plus

FMO14196.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:38:06 Download gff for FMO14196.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14442-RA 1041..2003 2..960 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:04:14 Download gff for FMO14196.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14442-RA 1041..2003 2..960 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:14 Download gff for FMO14196.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6692999..6693961 2..960 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:38:06 Download gff for FMO14196.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6587032..6587994 2..960 97   Minus