FMO14201.5prime Sequence
695 bp (695 high quality bases) assembled on 2014-07-25
> FMO14201.5prime
TCAGTCGACATGATTGAGCGGCGCAGTCAGCTGGATAAGATAATCATCAC
CGCCATGGACCGCTTCGTCTGGTTCGTCCTACTCGTGGTCATGTCCCACC
TGGTCACCGAGTTCACCCGCGTCTCTGGATATGCGCGTGGCCAGCGCCAC
GAGCTGGTGCTGCTGAATGATACGCTGCTGCAGCCCATGCCCGTGCAGAA
CATGGTGCTGTACCCCAGCCAGGAGTACGGCCAGTACCAGCAGCGACCCT
CCTCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCTCCTCCATGGGA
GCCATGAGCAGCCTGCAGCAGAACGCGGCATTTTTGCTCAGCAGCTTGGC
GGCGGGAGTGAGTCCGACAAATGGAGCAGCTGCACCCGGCAGCAACGCGG
CCATTTTGTCCCTCGGCGATAGCCAACCGGCTCACACGGCCGAGAGCACG
TATCCCATGTTCAGCTTGCGTCCGCTGATCGACAGCATTTTCGAGATTCC
AATTTCGACGCTGCGTGCTGTTAACAACCTGGTGGGTCGCCTGACCGGCG
GGTATCGCCAGGCGCCGGCGGAAGTGTCGCAAAAATCCGTGGCAGCTGGA
ACGGCGCTGCCGCCCGGCAGGCAAAACCCCACGCTGAGTGCCCATCCCAG
TGGGCAACGGATGCGCGAGGAGATGGCGGCAAGCTTCTAGACCAT
FMO14201.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9815-RC | 1108 | CG9815-RC | 249..917 | 10..678 | 3345 | 100 | Plus |
| CG9815-RD | 928 | CG9815-RD | 94..737 | 35..678 | 3220 | 100 | Plus |
| CG9815-RB | 979 | CG9815-RB | 148..788 | 38..678 | 3205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23421948..23422271 | 495..172 | 1620 | 100 | Minus |
| 2R | 25286936 | 2R | 23421712..23421896 | 678..494 | 925 | 100 | Minus |
| 2R | 25286936 | 2R | 23422435..23422568 | 171..38 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:27:08 has no hits.
FMO14201.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:19 Download gff for
FMO14201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9815-RC | 249..924 | 10..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:05 Download gff for
FMO14201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9815-RC | 249..924 | 10..686 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:05 Download gff for
FMO14201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23421705..23421894 | 496..686 | 98 | <- | Minus |
| 2R | 23421948..23422271 | 172..495 | 100 | <- | Minus |
| 2R | 23422435..23422566 | 40..171 | 100 | <- | Minus |
| 2R | 23431763..23431792 | 10..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:19 Download gff for
FMO14201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19309228..19309417 | 496..686 | 98 | <- | Minus |
| arm_2R | 19309471..19309794 | 172..495 | 100 | <- | Minus |
| arm_2R | 19309958..19310089 | 40..171 | 100 | <- | Minus |
| arm_2R | 19319286..19319315 | 10..39 | 100 | | Minus |
