Clone FMO14204 Report

Search the DGRC for FMO14204

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:142
Well:4
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43407-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14204.5prime Sequence

156 bp (156 high quality bases) assembled on 2014-07-25

> FMO14204.5prime
TCAGTCGACATGGGCGAATGTGTGAGGTGGCCGCCTGCGGACCGGGCTGA
AATGAACATGCACACATGCTGGCGAAGGGGCGGAGAAAATTTCAGAGGAG
GGGGAGTGCCCAGAGCAGGAGGATCGGGTCTGTCCAGCGCAAGCTTTCTA
GACCAT

FMO14204.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG43407-RA 368 CG43407-RA 93..221 10..138 645 100 Plus
CG43407-RB 488 CG43407-RB 93..221 10..138 645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19053169..19053297 138..10 645 100 Minus
Blast to na_te.dros performed on 2014-11-29 00:27:14 has no hits.

FMO14204.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:24 Download gff for FMO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43407-RB 85..224 1..142 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:13 Download gff for FMO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43407-RB 85..224 1..142 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:13 Download gff for FMO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19053166..19053301 1..142 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:24 Download gff for FMO14204.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19046266..19046401 1..142 95   Minus