FMO14206.5prime Sequence
599 bp (599 high quality bases) assembled on 2014-07-25
> FMO14206.5prime
TCAGTCGACATGATTTCGTTTTGCATTTCATCGCTTTTATCAGTGTGTAT
TTTTGCAAACCTTTACAATGGTTGTGCGGCAAAGCCCAACTGGGAGGCAA
CGCCATTGTCGATTGGTGGCACCACCACAAATCCCAGTGCCATGGACATG
AATCTGCGAATTGAGCGCATTTCAAGGTCGGAATTCGGGTTTTCAGGCAC
ATTCTTCTGGAATATTGATGTGGACGATAGCGTGATGGTCGAGATGCGTA
TTCTGAGCAGTTACTCCGGTGACGAGTCCGATTACAAACTGACTCCCATG
TCCATTCAACCGCAGAAATTCACCGAATATGTCAATACCTTTTACAAGGA
CCTGTTGTTGCCGAATCTGGGCAATTGCACCGATTTGCCCGTCTATGAAA
ATGAATTTGTACCACCCTGGCCCAAGGCGACCTACAATTTCACCCGCTGC
GCTCTGAACGGCCAAGGATTGCCGGATATTTTGGCAGATGGCTTCTATAA
AGGCGAAAGCCGTCATCACCGCCCAGCCAAATCTTGAAAGTCACCGTGTC
CGTCGTTCTGCGGATCAGAACGAAAATGTTCGCTAGCTTTCTAGACCAT
FMO14206.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-RB | 627 | CG18540-RB | 17..586 | 10..581 | 2810 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18299689..18300031 | 237..581 | 1625 | 99.4 | Plus |
| 2R | 25286936 | 2R | 18299474..18299630 | 83..239 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 18299333..18299407 | 10..84 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:27:21 has no hits.
FMO14206.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:29 Download gff for
FMO14206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18540-RB | 12..588 | 2..585 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:22 Download gff for
FMO14206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18540-RB | 12..588 | 2..585 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:22 Download gff for
FMO14206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18299690..18300033 | 238..585 | 98 | | Plus |
| 2R | 18299328..18299407 | 2..84 | 95 | -> | Plus |
| 2R | 18299476..18299628 | 85..237 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:29 Download gff for
FMO14206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14186833..14186912 | 2..84 | 95 | -> | Plus |
| arm_2R | 14186981..14187133 | 85..237 | 100 | -> | Plus |
| arm_2R | 14187195..14187538 | 238..585 | 98 | | Plus |
