FMO14207.5prime Sequence
594 bp (594 high quality bases) assembled on 2014-07-25
> FMO14207.5prime
TCAGTCGACATGGGTGGCGCTGGCGGAAAACTTCTTGGACTGCTGCTGTG
TTTGCTATTTCTAACAGAGTTGCATGGAGTCTTCATGAGGTTCACCAATG
TAACCTGCGAGAGCAAGGACCTCAGCATGAGTATCGTGGAGTACTGTGCG
GTTACTACGCTGAGCAAGAATAAAAACAGCATTAGCCTTCGGTACGCTAT
GCTCAAGCCTATGTTTACAAATATAGAGATCTACTTTCAGCTGATGACCA
GGGGCAGTGAGAGTATCCACGCGGCTTCAAACTGGCAGCCCTTCCTCCAT
ACGATGAAACTTGATTTGTGTCGATTCTGGAAAAACCACCACAACCATTT
GGCCAGAATGGTGTTTGAATTCATCGATGGGCACACAAACATGAACCACA
CTTGCCCCTATACCAAAGAAAAATACATTTCCATTGATGATTTGACAAAT
ACCGAAGTCTCCGCCAAGATCCGTGGAGTGCCAATGCCAAAGGGTTTCTA
CGCCTTGTTCACCACGTGGTCCACTGAAAACATAACTCGAGTTGTGACCA
ACTTTTACTTTGAAGTTATAAGCCCTGCAAGCTTTCTAGACCAT
FMO14207.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33914-RC | 2115 | CG33914-RC | 1382..1948 | 10..576 | 2835 | 100 | Plus |
| CG33914-RB | 961 | CG33914-RB | 228..794 | 10..576 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7037158..7037345 | 414..227 | 940 | 100 | Minus |
| 2R | 25286936 | 2R | 7036935..7037096 | 576..415 | 810 | 100 | Minus |
| 2R | 25286936 | 2R | 7037393..7037545 | 228..76 | 765 | 100 | Minus |
| 2R | 25286936 | 2R | 7037603..7037669 | 76..10 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:27:24 has no hits.
FMO14207.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:30 Download gff for
FMO14207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33914-RB | 220..794 | 1..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:27 Download gff for
FMO14207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33914-RB | 220..794 | 1..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:27 Download gff for
FMO14207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7036935..7037096 | 415..576 | 100 | <- | Minus |
| 2R | 7037158..7037343 | 229..414 | 100 | <- | Minus |
| 2R | 7037393..7037545 | 76..228 | 100 | <- | Minus |
| 2R | 7037604..7037676 | 1..75 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:30 Download gff for
FMO14207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2924440..2924601 | 415..576 | 100 | <- | Minus |
| arm_2R | 2924663..2924848 | 229..414 | 100 | <- | Minus |
| arm_2R | 2924898..2925050 | 76..228 | 100 | <- | Minus |
| arm_2R | 2925109..2925181 | 1..75 | 96 | | Minus |
