FMO14208.5prime Sequence
192 bp (192 high quality bases) assembled on 2014-07-25
> FMO14208.5prime
TCAGTCGACATGTTGACGCTTACACTTGGATTTGCGATGCAGTTGCTGCT
GTTGATTTCGCTGCTACTGCTACTTCCACTGCCCGGATTTTCGAGAGAAC
TAAGGCAGCCCTATAGATACGACAGATACGACGGTAATCCTGGCCAAAAC
CAACCAAGGAATTTGGAGCGGAACGCAAGCTTTCTAGACCAT
FMO14208.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43351-RA | 242 | CG43351-RA | 14..178 | 10..174 | 825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19030022..19030186 | 10..174 | 825 | 100 | Plus |
Blast to na_te.dros performed 2014-11-29 00:27:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1084..1135 | 82..32 | 122 | 73.1 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1099..1153 | 82..26 | 118 | 72.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6814..6885 | 82..11 | 117 | 62.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2386 | 71..11 | 116 | 65.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2393 | 71..26 | 115 | 74.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2823 | 76..36 | 106 | 73.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6712..6770 | 94..36 | 106 | 64.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2340 | 70..36 | 103 | 77.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2824..2887 | 74..11 | 103 | 66.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2626..2685 | 74..12 | 101 | 65.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6847..6892 | 76..32 | 101 | 71.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1105..1151 | 82..36 | 100 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2842 | 69..32 | 100 | 73.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1062..1125 | 71..11 | 96 | 65.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1558..1587 | 71..42 | 96 | 80 | Minus |
FMO14208.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:31 Download gff for
FMO14208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43351-RA | 4..178 | 1..174 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:31 Download gff for
FMO14208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43351-RA | 4..178 | 1..174 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:31 Download gff for
FMO14208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19030012..19030186 | 1..174 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:31 Download gff for
FMO14208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14917517..14917691 | 1..174 | 97 | | Plus |
