Clone FMO14210 Report

Search the DGRC for FMO14210

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:142
Well:10
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43193-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14210.5prime Sequence

492 bp (492 high quality bases) assembled on 2014-07-25

> FMO14210.5prime
TCAGTCGACATGTACGTGCCTCGAACTGCAACGACAGCTGCTCCTGCCCC
AGTTACCCGGAACCAGGATTCTGGATCCTGGATCCAGCGCCCAGTACCCA
GGATTCAGAATCCAGAACCCAGAACCCAGAATCCAGCCTCCACTTTGGGA
CCCTGTGTGCGCATATATATTTATTCCATGTACATATTCTTGCACGTCGC
AAAAGAGCAGAGGTCCGGGGAAAAGGACACGGGACGCAGGTCTGAGCACT
CCGGACAAAGGGTGACTGCTGCCGTTTATTGTCCTGCTCCTGCTTCTGCT
CCGGCTCCTGCGAATGGCGGAGCACTGGAGCTGTGGAGAAACGTGGCCGG
GCAAGTGACCCAGAAAGTACCAGTAACCAGCAATAAATGGCAATATTTGA
TGGATTACTTGAGCGTTACTTTGACTTGCCAACGAAAAGAAGAGTATAAT
TTTATCGTGTTTGTGGGCGGACGTGCAAGCTTTCTAGACCAT

FMO14210.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-29 00:26:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20865386..20865671 189..474 1430 100 Plus
X 23542271 X 20865152..20865331 9..188 900 100 Plus
Blast to na_te.dros performed 2014-11-29 00:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1079..1122 310..267 112 72.7 Minus

FMO14210.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:16 Download gff for FMO14210.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43193-RA 335..809 1..478 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:54 Download gff for FMO14210.5prime
Subject Subject Range Query Range Percent Splice Strand
X 20865147..20865331 1..188 97 -> Plus
X 20865386..20865675 189..478 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:54 Download gff for FMO14210.5prime
Subject Subject Range Query Range Percent Splice Strand
X 20865147..20865331 1..188 97 -> Plus
X 20865386..20865675 189..478 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:16 Download gff for FMO14210.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20736413..20736702 189..478 99   Plus
arm_X 20736174..20736358 1..188 97 -> Plus