FMO14210.5prime Sequence
492 bp (492 high quality bases) assembled on 2014-07-25
> FMO14210.5prime
TCAGTCGACATGTACGTGCCTCGAACTGCAACGACAGCTGCTCCTGCCCC
AGTTACCCGGAACCAGGATTCTGGATCCTGGATCCAGCGCCCAGTACCCA
GGATTCAGAATCCAGAACCCAGAACCCAGAATCCAGCCTCCACTTTGGGA
CCCTGTGTGCGCATATATATTTATTCCATGTACATATTCTTGCACGTCGC
AAAAGAGCAGAGGTCCGGGGAAAAGGACACGGGACGCAGGTCTGAGCACT
CCGGACAAAGGGTGACTGCTGCCGTTTATTGTCCTGCTCCTGCTTCTGCT
CCGGCTCCTGCGAATGGCGGAGCACTGGAGCTGTGGAGAAACGTGGCCGG
GCAAGTGACCCAGAAAGTACCAGTAACCAGCAATAAATGGCAATATTTGA
TGGATTACTTGAGCGTTACTTTGACTTGCCAACGAAAAGAAGAGTATAAT
TTTATCGTGTTTGTGGGCGGACGTGCAAGCTTTCTAGACCAT
FMO14210.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-29 00:26:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:26:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20865386..20865671 | 189..474 | 1430 | 100 | Plus |
X | 23542271 | X | 20865152..20865331 | 9..188 | 900 | 100 | Plus |
Blast to na_te.dros performed 2014-11-29 00:26:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1079..1122 | 310..267 | 112 | 72.7 | Minus |
FMO14210.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:16 Download gff for
FMO14210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43193-RA | 335..809 | 1..478 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:54 Download gff for
FMO14210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20865147..20865331 | 1..188 | 97 | -> | Plus |
X | 20865386..20865675 | 189..478 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:04:54 Download gff for
FMO14210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20865147..20865331 | 1..188 | 97 | -> | Plus |
X | 20865386..20865675 | 189..478 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:16 Download gff for
FMO14210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20736413..20736702 | 189..478 | 99 | | Plus |
arm_X | 20736174..20736358 | 1..188 | 97 | -> | Plus |