FMO14212.5prime Sequence
690 bp (690 high quality bases) assembled on 2014-07-25
> FMO14212.5prime
TCAGTCGACATGGCTGCGCCGGTCATTGTCGAGGCCACGGTCAAGCAAAC
CGCCACGCTGATCTTCATGCACGGCCTGGGTGATACGGGTCATGGCTGGA
GCAGTGCCCTAGCCGCCATCCGCCCACCTTTCATGAAAGTCATCTGCCCC
ACGGCGCCCACACAGCCCGTTTCGCTGAACGCCGGCTTCCGCATGCCGTC
GTGGTTTGACCTGAAGACGCTGGACATCGGTGGGCCCGAGGACGAGCCGG
GCATCCAGTCGGCGCGTGATAGTGTGCACGGTATGATCCAGAAGGAGATT
AGCGCTGGGATTCCGGCCAATCGCATTGTCCTGGGCGGATTCTCGCAGGG
CGGAGCCTTGGCACTGTACTCGGCACTCACGTACGATCAGCCGCTGGCCG
GCGTGGTGGCCCTATCCTGTTGGCTGCCGCTGCACAAGCAGTTCCCAGGC
GCCAAGGTGAACAGCGATGATGTGCCGATTTTCCAGGCGCATGGCGACTA
CGATCCCGTGGTGCCGTACAAATTCGGCCAGCTGAGCGCCAGCCTGCTCA
AGTCGTTCATGAAGAATGTGACGTTCAAGACGTACAGTGGACTATCGCAC
TCGTCGTCCGACGACGAAATGGATGACGTCAAGGACATCATCAGTAAATG
GCAACAGGCAAACAATCATCTGGCAAGCTTTCTAGACCAT
FMO14212.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18815-RD | 1373 | CG18815-RD | 209..874 | 7..672 | 3330 | 100 | Plus |
| CG18815-RE | 1136 | CG18815-RE | 209..853 | 7..651 | 3225 | 100 | Plus |
| CG18815-RC | 1181 | CG18815-RC | 143..787 | 7..651 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11628960..11629505 | 89..634 | 2730 | 100 | Plus |
| 3L | 28110227 | 3L | 11628451..11628505 | 7..61 | 260 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:27:04 has no hits.
FMO14212.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:18 Download gff for
FMO14212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18815-RD | 203..880 | 1..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:02 Download gff for
FMO14212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18815-RD | 203..880 | 1..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:02 Download gff for
FMO14212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11628445..11628501 | 1..57 | 94 | -> | Plus |
| 3L | 11628563..11628594 | 58..89 | 100 | -> | Plus |
| 3L | 11628961..11629504 | 90..633 | 100 | -> | Plus |
| 3L | 11629581..11629598 | 634..651 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:18 Download gff for
FMO14212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11621545..11621601 | 1..57 | 94 | -> | Plus |
| arm_3L | 11621663..11621694 | 58..89 | 100 | -> | Plus |
| arm_3L | 11622061..11622604 | 90..633 | 100 | -> | Plus |
| arm_3L | 11622681..11622698 | 634..651 | 100 | -> | Plus |
