Clone FMO14216 Report

Search the DGRC for FMO14216

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:142
Well:16
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43185-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14216.5prime Sequence

231 bp (231 high quality bases) assembled on 2014-07-25

> FMO14216.5prime
TCAGTCGACATGAAGCCGGGCCCATTTACGCAAGTTGACTGTACAAACGC
CATGCATTTGAGACAACTCCTTACCGAAATGGTTATTATCTTGACCATAT
TGACCATTCCTGGCTATACCATTCACACCTTGGCAGAGAAGAAAATCAGC
CAATATCCTTGGATCCCGAAGACGTCAACGCATATTACACCTTATAAGAT
ATCTGGGGATATAGCAAGCTTTCTAGACCAT

FMO14216.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG43185-RD 477 CG7-RD 179..382 10..213 1020 100 Plus
CG43185-RC 464 CG7-RC 200..403 10..213 1020 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5885265..5885396 82..213 660 100 Plus
2L 23513712 2L 5885131..5885203 10..82 365 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:27:51 has no hits.

FMO14216.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:43 Download gff for FMO14216.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43185-RB 172..386 1..217 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:52 Download gff for FMO14216.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43185-RC 193..407 1..217 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:52 Download gff for FMO14216.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5885124..5885203 1..82 96 -> Plus
2L 5885266..5885400 83..218 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:43 Download gff for FMO14216.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5885124..5885203 1..82 96 -> Plus
arm_2L 5885266..5885400 83..218 97 -> Plus