FMO14217.5prime Sequence
408 bp (408 high quality bases) assembled on 2014-07-25
> FMO14217.5prime
TCAGTCGACATGTGCATGGTCACATCCGTATCCCCCGAAGTCTGCACCAG
CTTCTATGCCACATGGTGCTTAGTTTGGGGGTCCTTGTTTGGGTTCGGTT
ACTCGTTCTTGCTCCTTGCCGATCTGATGGAAGTCGTAACAGTTGACAGA
AATTTTCCGTTCCAAAGGACACTCAGGGTGGTCATTGCTGGTTTGGGACT
TTCCTATCTTGGGGCGGGAATTTTAATGACTCTTGGCATAAAATACAATA
AGCCAATTGTGTTTAAATGTGGAAAGTTCTTGTGCTTAATATTTGCAATT
GGTTCAATTCCGACTATAATCTTTCCTGTTGTGCATTTCTGCACAATTCC
CTGCTTGTGTCGGTATATGAAAAATCGATGGAACAAGGGCGCAAGCTTTC
TAGACCTT
FMO14217.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43393-RA | 1138 | CG43393-RA | 29..409 | 10..390 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22090427..22090663 | 246..10 | 1185 | 100 | Minus |
| 2R | 25286936 | 2R | 22090291..22090376 | 328..243 | 415 | 98.8 | Minus |
| 2R | 25286936 | 2R | 22090152..22090214 | 390..328 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:27:54 has no hits.
FMO14217.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:44 Download gff for
FMO14217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43393-RA | 29..417 | 10..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:55 Download gff for
FMO14217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43393-RA | 29..417 | 10..398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:55 Download gff for
FMO14217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22090427..22090663 | 10..246 | 100 | | Minus |
| 2R | 22090144..22090213 | 329..398 | 95 | <- | Minus |
| 2R | 22090291..22090372 | 247..328 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:44 Download gff for
FMO14217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17977649..17977718 | 329..398 | 95 | <- | Minus |
| arm_2R | 17977796..17977877 | 247..328 | 100 | <- | Minus |
| arm_2R | 17977932..17978168 | 10..246 | 100 | | Minus |
