FMO14218.5prime Sequence
441 bp (441 high quality bases) assembled on 2014-07-25
> FMO14218.5prime
TCAGTCGACATGATATATCTACAGAGTTGCTGCTGCTGCGTGGATCTGCG
AATCGGAACCATAGCAATAGGGATTTTGCACATTATAGCGGATATCCTTG
GAGGCACATTTGTTGCTTTATTTGGGGAGTCGGGTATTCCCGATTTGGGT
CACACCCTATTCATTATCTTCGTTATGCTGCACATCCTGAGCTGCGTTTT
CCTGATCATCGGCAGTATACGGTTACGGAGCAGCTGGATGCTCTTCTACA
TAATAATGACTATGATCATGGCGGTAGCAATGCTCATATTGATAGTATCC
GACGTCATACTCGCCGTTTGTTTCTGGGTAATGATCACGTATGCTATAAT
GTTCTTTATTTGCCTTTATTCCTGGCTAGTGGCGTACTCTTTTTACGCCG
CCTTAGGAGGACCTCTCTTCATCGCAAGCTTTCTAGACCAT
FMO14218.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-RA | 608 | CG43183-RA | 126..540 | 9..423 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8592641..8592774 | 222..355 | 670 | 100 | Plus |
| 2R | 25286936 | 2R | 8592320..8592447 | 9..136 | 640 | 100 | Plus |
| 2R | 25286936 | 2R | 8592495..8592584 | 133..222 | 450 | 100 | Plus |
| 2R | 25286936 | 2R | 8592834..8592901 | 356..423 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:27:57 has no hits.
FMO14218.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:46 Download gff for
FMO14218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43183-RA | 126..544 | 9..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:01 Download gff for
FMO14218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43183-RA | 126..544 | 9..427 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:01 Download gff for
FMO14218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8592496..8592584 | 134..222 | 100 | -> | Plus |
| 2R | 8592642..8592774 | 223..355 | 100 | -> | Plus |
| 2R | 8592320..8592444 | 9..133 | 100 | -> | Plus |
| 2R | 8592834..8592906 | 356..425 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:46 Download gff for
FMO14218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4479825..4479949 | 9..133 | 100 | -> | Plus |
| arm_2R | 4480001..4480089 | 134..222 | 100 | -> | Plus |
| arm_2R | 4480147..4480279 | 223..355 | 100 | -> | Plus |
| arm_2R | 4480339..4480411 | 356..425 | 94 | -> | Plus |
