FMO14219.5prime Sequence
950 bp (797 high quality bases) assembled on 2014-07-25
> FMO14219.5prime
TCAGTCGACATGGATCACCGTTACAGAAGATCGTTAAGGAGCTCAGCAGA
TGTGTGGAGTCGCAGCATCCTGGGACGCATCCAGGCAACCCTCGGTCGCC
AGAAGGCCGTCAAGATGATGGAGCTGTCGGCCAGTGCTGGTGATCACCAG
AGCTGGGAGGAGATGAAGCAGCAGAGCTCGGCCTTCGCGGTCCTGGGACG
CAGGCCAAGAATGGAGGATAGGTTTATTATCGAGGAGAACATCAACAACA
ACACTGGTATCTCCTTCTTTGCCGTATTTGACGGTCATGGCGGCGAGTTT
GCCGCAGACTTCGCCAAGGATGTGCTGGTGAAGAACATCTACAATAAGAT
CATCGAGATGTCCAAGCTTCTGAAGACGGAAGGAAATTCCGGAGATTACG
ATAAGAGTCCCTATTTAGCGCGCAAGCAGAGTCGCAAGGATGCAAACAAG
GAGAACACAGAACCGACGGCAGGGGTGATGCGAAAGGATAGTCTAAGGAA
GGCCCACAGCACCACGGCGGATTGTAGTGCTATTAAGCAAAAGACAACCG
AGGCATCCATTGCCGACATCTACACAGTCCAATTAAACTCGGCGATGAGA
GCCAGTGGGAATTTGGGAGCCGCCAAGGATTCCTTCCTCAACAACAACAA
CAACGGACAGAACGGAGCAGCCAATGCGCCACCTCCAAACTACGAAGCCA
AGTGCTACATCGAACACGGACGTATTAACTTTGGTTAAACTGATCACGGA
CGAGATCATGTCGGCCGACTACAGCTTGTGAGCAGCCAGAGAGCGACCAA
CATTGCGGACCACCGCTCTAATAGCGATAGTTCAAGGCTCAAGCTGATTG
GTGGCCATGGTGGGCGACTCCCCGCGAGTCATGTTACGACTGGGCGTGAT
TCCGCCTATACCGCCTTCATTCGATCACAGCCGCAGCCAAGTGGCGAGAC
FMO14219.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-RC | 1995 | CG7115-RC | 119..1059 | 10..949 | 4210 | 97.5 | Plus |
| CG7115-RD | 2001 | CG7115-RD | 119..1065 | 10..949 | 4140 | 96.9 | Plus |
| CG7115-RE | 2612 | CG7115-RE | 774..1676 | 48..949 | 4020 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7823449..7824002 | 219..773 | 2725 | 99.8 | Plus |
| 2L | 23513712 | 2L | 7822927..7823103 | 48..224 | 885 | 100 | Plus |
| 2L | 23513712 | 2L | 7824087..7824178 | 795..884 | 210 | 89.2 | Plus |
| 2L | 23513712 | 2L | 7821269..7821308 | 10..49 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:28:02 has no hits.
FMO14219.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:48 Download gff for
FMO14219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RC | 113..1059 | 1..950 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:07 Download gff for
FMO14219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RC | 113..1059 | 1..950 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:07 Download gff for
FMO14219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7821263..7821308 | 1..49 | 91 | -> | Plus |
| 2L | 7822929..7823100 | 50..221 | 100 | -> | Plus |
| 2L | 7823452..7824028 | 222..795 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:48 Download gff for
FMO14219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7821263..7821308 | 1..49 | 91 | -> | Plus |
| arm_2L | 7822929..7823100 | 50..221 | 100 | -> | Plus |
| arm_2L | 7823452..7824028 | 222..795 | 99 | -> | Plus |
