FMO14220.5prime Sequence
336 bp (336 high quality bases) assembled on 2014-07-25
> FMO14220.5prime
TCAGTCGACATGCGTCCACAGATTGCAATGTTACTATTGATAACTGCTTG
GAAAAGTAGCCTATCAGATCCGATAGGTCCCCGTTCCTATGAAAACTATT
CAGTGTATAAGGTTTTCATTAAAACTCGGTCGGATCAACAGGTTATCGAT
GGACTGCTGAAGGACACAGACAATTATAACTTGTGGCATCGTGGCTTAAA
TGTAGTTCACATAATGGTGAGCCCTGTGGAAAAGGATTCTTTCCTAGCTG
TAATGCAAAAGGAAAATATTGTTGTGGAAGTACTTATAAAAAATGTTCAG
ACACTTATTGATAGATACGCAAGCTTTCTAGACCAT
FMO14220.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43235-RA | 678 | CG43235-RA | 107..422 | 3..318 | 1550 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7693136..7693307 | 3..174 | 830 | 98.8 | Plus |
| 2L | 23513712 | 2L | 7693365..7693492 | 175..302 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:28:06 has no hits.
FMO14220.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:50 Download gff for
FMO14220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43235-RA | 105..422 | 1..318 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:13 Download gff for
FMO14220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43235-RA | 105..422 | 1..318 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:13 Download gff for
FMO14220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7693134..7693307 | 1..174 | 98 | -> | Plus |
| 2L | 7693365..7693492 | 175..302 | 100 | -> | Plus |
| 2L | 7693550..7693565 | 303..318 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:50 Download gff for
FMO14220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7693134..7693307 | 1..174 | 98 | -> | Plus |
| arm_2L | 7693365..7693492 | 175..302 | 100 | -> | Plus |
| arm_2L | 7693550..7693565 | 303..318 | 100 | | Plus |
