FMO14221.5prime Sequence
423 bp (423 high quality bases) assembled on 2014-07-25
> FMO14221.5prime
TCAGTCGACATGGGGCGGTTGCTGTTTGTTCTTCTGATTTGTTCCCCAAT
ACTGTCAATTAAATTCCAAGCAAATGCAGAGGATAACTCAACAAAGAATG
GCTTAGATCGAAACAGAGAAGGAGGTAAATCTTATGGAGGTCATAAGGCG
AATGTACCAGATGTTTCAAGGTTTCAAAGATCATGTTCAACTCAAGAATG
TAAGGAAAAGGAATTCAATGATATCCTCGACTCCATTCTGAGCTCGGAAA
CAACTACGGAGCCTGAACGGGAAGAGGCTCCACCGAGGAATGTTCCACAG
AGACCAAATCGACCCTACATGGTTCGACCCAGCAGTAACGGGCACTTTCT
TCATGACATTGTAACTTGGGTTGAAAGAACAAAGAGGGCAATATTTGGAT
TTGGAGCAAGCTTTCTAGACCAT
FMO14221.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43254-RB | 491 | CG43254-RB | 25..420 | 10..405 | 1980 | 100 | Plus |
| CG43254-RA | 479 | CG43254-RA | 25..408 | 10..405 | 1790 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7739036..7739246 | 405..195 | 1055 | 100 | Minus |
| 3R | 32079331 | 3R | 7739412..7739539 | 137..10 | 640 | 100 | Minus |
| 3R | 32079331 | 3R | 7739296..7739356 | 196..136 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:28:09 has no hits.
FMO14221.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:52 Download gff for
FMO14221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43254-RB | 18..427 | 1..414 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:18 Download gff for
FMO14221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43254-RB | 18..427 | 1..414 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:18 Download gff for
FMO14221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7739028..7739244 | 197..414 | 98 | <- | Minus |
| 3R | 7739296..7739355 | 137..196 | 100 | <- | Minus |
| 3R | 7739413..7739546 | 1..136 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:52 Download gff for
FMO14221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3564750..3564966 | 197..414 | 98 | <- | Minus |
| arm_3R | 3565018..3565077 | 137..196 | 100 | <- | Minus |
| arm_3R | 3565135..3565268 | 1..136 | 97 | | Minus |
