Clone FMO14222 Report

Search the DGRC for FMO14222

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:142
Well:22
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43249-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14222.5prime Sequence

258 bp (258 high quality bases) assembled on 2014-07-25

> FMO14222.5prime
TCAGTCGACATGGATTACCTGTTGAAAGCGATATTTGTTCTAATCCTTCT
GAGCATCCACTGCACCAATGGATATGTTAATGGCCGCCACGAGATAGTCA
GAAGGGAGGTGAACGTGACAGAGGTGGATCGCGGATTGAGTGGAGCACTA
ACCATGTTTTTCCAGCCCCTTGCTGATTTTGCTGCCAAGTTAAAGATGGA
GATACCCATGATTACACACTTCCGCACCAAACATTTTAACGCAAGCTTTC
TAGACCAT

FMO14222.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG43249-RA 324 CG43249-RA 19..249 10..240 1155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16304377..16304587 30..240 1055 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:27:36 has no hits.

FMO14222.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:33 Download gff for FMO14222.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43249-RA 11..252 2..244 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:40 Download gff for FMO14222.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43249-RA 11..252 2..244 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:40 Download gff for FMO14222.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16304378..16304590 31..244 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:33 Download gff for FMO14222.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16297478..16297690 31..244 99   Plus