FMO14224.5prime Sequence
939 bp (829 high quality bases) assembled on 2014-07-25
> FMO14224.5prime
TCAGTCGACATGGACTTTGAAGATGATGAGGAGGTTGTGCAACCGCACTA
TGCTCAGAAATTCCGGGCTCCCACCGATCCCCTCCTTCTGGCCACATATG
AGCTTTTTAAGCCCTCTCATCAGACCTTGAACCTATACAGCGAACGGAAT
CGCGAGATTTTTGCGGAGGCCTTTATAGAGGGAAACTTGAACACTTTAGT
CAATCTGAGCGTAAAGAGTCTGGCCAAGCTGGGCATTCGAGGCATATCTC
CAACTTTGCAGGCGAGTCCCCAGCTTATGAGGATATTTTACGACGCACTG
GATGTGGAGCTGCCTTTGAGAGATTGCTATTTGATCGAGGATCAACGATT
TTGGCGACGCGTCGTACTAAGCAAGACTTTGGACAAAACGTTGCACCTGA
AGCGCTGGAACGAGTTCGACTGGAAGGCTGAGGGTGTGAGCCGGAAGTTT
GTGGAGCAGGTTGAATCATGTCCTGTGAACGTGAAGCCGCAGAGAAGGCT
GGCTCAGTTGGCTGAAATTGTTTGGCAGTATGTCAACTCCATGCACATCC
GCAAGCTGCAAGCTCTGCCCGACTATGCCTTCATTAAGCACTTGGAGAGC
GAGCCTGAAGAGGATATATCCTCGGAGTCATCCGACGAGGAGGAGATATC
TAGCGATGAGCCGGATACGGAAATGGACGAGGGCGAGGAGGAGCACAAGT
CTAGTAGTTCCAGCAGCGAGGCAGCTATTACTTTCTGGCGTGCGGAAACC
GAGACGAGGACACATTCGCGGAATGCGCGACATCTGCGCACGCACCGCAG
CAGCTCGGGATGCCATTGCTAGGAACGGGAGATCGCAGGAGCGCAGAGAG
CGCCAGGAGAAACTGACGCTGGAGAATGCGGATCATCGGGCCGAAAGAGA
AAGAGAAGGACCGCCAATCGACGTGTTCAGCATAACGTT
FMO14224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:27:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15580-RA | 2371 | CG15580-RA | 47..1001 | 10..935 | 4070 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6056582..6057056 | 790..319 | 2225 | 99.4 | Minus |
| 3R | 32079331 | 3R | 6057180..6057490 | 320..10 | 1555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:27:39 has no hits.
FMO14224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:35 Download gff for
FMO14224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15580-RA | 38..916 | 1..865 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:05:44 Download gff for
FMO14224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15580-RA | 38..916 | 1..865 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:05:44 Download gff for
FMO14224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6056496..6057054 | 321..865 | 97 | <- | Minus |
| 3R | 6057180..6057499 | 1..320 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:35 Download gff for
FMO14224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1882218..1882776 | 321..865 | 97 | <- | Minus |
| arm_3R | 1882902..1883221 | 1..320 | 98 | | Minus |
