FMO14227.5prime Sequence
857 bp (709 high quality bases) assembled on 2014-07-25
> FMO14227.5prime
TCAGTCGACATGCCCTCGGCAAAGGAAAAACGATTGCGCAGGGAAAGAAT
ACTACAGTTCATACGCGAAAATAGGGAGCTCATGCCCATTAGTTCGACGA
CAGTACTAAAGCCACCTACGGTTAAAAAAGAGGACACTTTAAAGCAAAAA
AAACGTGTCACATTTACCCATGGCAAACAGAGGAGTATTGGGGAGTCGAC
CAGAAACAAGGATAACGAGCAGAATATTGGTCAGGGCCTAACGTCCTGTT
TGATCACCAGGTCCTCGGATACCCGATTAGCCAGCGGAGCCAACAACCCA
ACAGAGATTACGGCGGAAAAACTCCATCGAACCGACAGCAAAAGCCATTT
GAAGACGTCATGCACAAAATGCCAAGACTCTCGATTATCGGCTGGTACAA
ATAATCCAGCGGCGCGAGATGTTGGCAAATTACCACGAACCGACAGCGAG
TGCAAGTTCAACGAGCCCGGAATCTTTTTTCTGCAGAAACCCCATTCGGA
TTTTACCACTCAGGAAGTCAAGCTGAACGCAAAGCCTATAAGAAAGGAGT
TGAAGAACAAGTGCGACTTCTTTCCGAAATATGTGGACAATCGACCATTC
AAGGATGAAGGCGACACAAACCCTCTATAGGGAATCTTCTGCGCAGACTT
TGGGCCTTTTTACCTGAAATACTGAACAGGACAAGTCGGAAACTTTTGAG
CTTTATACACTATAATGCTGCAGCGACAGCACGGAATGCATGAGTGAGTT
TTGGAGCGGGCCGTCGACGATGAATCAGTAAGCACTGATGATACTTAAAC
GACTCTGTGAGGCGAGGGAAGTGTTATCAACGCAGTACAGAGATCTGAAG
CTTCGAT
FMO14227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15144-RB | 3362 | CG15144-RB | 128..983 | 10..839 | 3550 | 96 | Plus |
| CG15145-RA | 2787 | CG15145-RA | 385..503 | 550..670 | 225 | 81.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17528718..17528995 | 287..10 | 1390 | 100 | Minus |
| 2L | 23513712 | 2L | 17528257..17528493 | 631..394 | 1140 | 99.6 | Minus |
| 2L | 23513712 | 2L | 17528557..17528667 | 396..286 | 555 | 100 | Minus |
| 2L | 23513712 | 2L | 17528119..17528202 | 711..628 | 325 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:28:30 has no hits.
FMO14227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:01 Download gff for
FMO14227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15144-RB | 70..776 | 4..711 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:48 Download gff for
FMO14227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15144-RB | 122..828 | 4..711 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:48 Download gff for
FMO14227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17528258..17528492 | 395..630 | 99 | <- | Minus |
| 2L | 17528559..17528666 | 287..394 | 100 | <- | Minus |
| 2L | 17528719..17529001 | 4..286 | 98 | | Minus |
| 2L | 17528119..17528199 | 631..711 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:01 Download gff for
FMO14227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17528119..17528199 | 631..711 | 97 | <- | Minus |
| arm_2L | 17528258..17528492 | 395..630 | 99 | <- | Minus |
| arm_2L | 17528559..17528666 | 287..394 | 100 | <- | Minus |
| arm_2L | 17528719..17529001 | 4..286 | 98 | | Minus |
