FMO14228.5prime Sequence
794 bp (434 high quality bases) assembled on 2014-07-25
> FMO14228.5prime
TCAGTCGACATGCGAAAGAATACCATTTGGAACTACTCTTTAATATTCTT
CTGCTGTGTGCTGAAGAGCATAAGTACGCTAGATCATGGCCCGCACACAG
TATCAGTCGATTCGAATCGACACAACACACAGCATCAGTATAAGCAAAAT
CCCAATGTTGCCTCACAACGTCACTCATCCCACGAATCTGGTCAGAGTTT
ACACAATTCGCAATCGGAACATGTCACCCATATTGCCGCATCGCACGCCG
GAAGCGGCGGAGAGCACTCCACTCATTTGGCGCAAAATCTGCACAGGAGC
TCATATAATCTTCTGAGCGAGGCCATGTCCCAGGCTGTCAGCAATGAATT
TAGTTCCTGGGAAGGGTTCAGCGGATGGAGCGTGTGCTGCTGATGATTTT
GATTGCTACAGTGGAATGTCGGATCGCTTGGCATGAGGTATTGCAGCTTG
CTCGCCGCTAGATGATGACGATATGAAACTCATTTGACGAGCCGATGACT
TTTGCGGAGGAATTGAGTACGATTCGGCTACAAAGCGGCAAACGTTCCTT
CATGACATATGCTATATCGGCCAAAACTTGGAGCTGGTCAACGAGGATAT
TGACCTCAGCAACCCATGCTGTCATCGTCACTCCCAACTTGTCGTCATAC
AAGTATGCGTGCTGCAATGGTGGATACTCGATGTGCATGATGCTCAACTT
CCACAAAACCTGAGATGAGGTCGTGGCCCCAAATGACCTGAAATCTTGAC
CGTGTATGATTTGTTGACCACCAAAAAAGCACGTTCCAAGCGAA
FMO14228.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stim-RD | 2141 | CG9126-RD | 193..789 | 10..575 | 2170 | 94.1 | Plus |
| Stim-RA | 2255 | CG9126-RA | 193..789 | 10..575 | 2170 | 94.1 | Plus |
| Stim-RF | 2319 | CG9126-RF | 153..497 | 10..354 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15938756..15939100 | 354..10 | 1725 | 100 | Minus |
| X | 23542271 | X | 15937689..15937740 | 416..365 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:28:33 has no hits.
FMO14228.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:03 Download gff for
FMO14228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Stim-RA | 185..746 | 1..540 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:52 Download gff for
FMO14228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Stim-RA | 185..746 | 1..540 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:52 Download gff for
FMO14228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15938758..15939108 | 1..352 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:03 Download gff for
FMO14228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15832791..15833141 | 1..352 | 98 | | Minus |
