FMO14229.5prime Sequence
990 bp (863 high quality bases) assembled on 2014-07-25
> FMO14229.5prime
TCAGTCGACATGCCTAGTGATAAAGAAAGTCCAGAAACCAAGCCACTGAA
CAATAACAATACAAATGGAAACGGTGGCAGTGTACCAAGCAAGCCAAAGA
TCCAGCCAAAATATAGCATTCACCGAGATGTGCTGACCCATGAGGTGGTG
ATAAAGCAAACAGGATATGCGGCCAGGGACAAGAGCATACCCTCCTCGCT
GCGAAACTGCTGGCGGAGCTGGAACTTCTTTGCACTCTTCACCGGCGTGA
TTCCCATTCTGCAATGGCTACCCCAGTATTCACCCAGGAGAGATCTTCCT
GGCGATATAATCGCCGGCTTCACCGTCGCCATCATGAACATACCTCATGG
CATGGCTTATGGCATTCTAGCAGGAGTTTCGGCTGGAAATGGTCTCTATA
TGGCCGTGTTTCCGGTGCTGGCCTACATGTTCCTGGGGACCTCCAAGCAC
ATCTCCATCGGCACTTTTGCGGTGGCCAGCATGATGACGGCAAAGGTGGT
GGATACGTATGCCAACGTAGATGACCACCATCAGATATTGCCTATTAACG
CCTTCGGTTTGCAATCGAATGGAAACAGCGACTGCGTCCCCACTCCTGCT
AATAAATTCCTCAGCGCTTGCGGATTCTGTCTCCTCAACCACTATATCAC
CTTTTCAGCTTTTAAATTCTACTCTAAATGCGGATCCCATTACTAAAATA
GAGGTGGCGACCTCTTTGGCACTTACCGTGGGAATTGTAAACCTCCTATG
CCTTTCTAGACTGGGACCCTGTCATCCCTTTTGAGTGACTCTGTGATGAT
TCACACTGCTGCAGCGTGTCACGTGTACGCCAGCTGACGATGTGCTGGCA
TCTCAGTACGCGTCACAAAGTGCATCAGATCATATATACGTATGACGTGA
TCAGGGATGCCCAACGATCTTGTGACTTTGCCTTTGTATGGCTGTGATGC
GTCATGATAGATCTCGCCATGAATCCTAAGCCGCGCAACT
FMO14229.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prestin-RA | 3553 | CG5485-RA | 945..1951 | 10..985 | 4100 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17900958..17901663 | 742..36 | 3485 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:28:40 has no hits.
FMO14229.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:04 Download gff for
FMO14229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prestin-RA | 945..1936 | 10..972 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:56 Download gff for
FMO14229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prestin-RA | 945..1936 | 10..972 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:56 Download gff for
FMO14229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17900958..17901663 | 36..742 | 99 | <- | Minus |
| 3L | 17901728..17901753 | 10..35 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:04 Download gff for
FMO14229.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17894058..17894763 | 36..742 | 99 | <- | Minus |
| arm_3L | 17894828..17894853 | 10..35 | 100 | | Minus |
