FMO14233.5prime Sequence
910 bp (799 high quality bases) assembled on 2014-07-25
> FMO14233.5prime
TCAGTCGACATGTTACGTCGAGGGCCAACGGGCTTCATATCCGCCCTGAT
CTTCGCGAGCCTCTGTCTGGGCTTCTGTCGGGGCTACTTCAGTCTGGAGG
TGGGTGATCCCTGTCCCACGGTCAATTACCGCAGTCGCTGCCAAGCGCTG
GAGGATTGTGAGACTCTGGCGTCGCATCTTAAAACGGGACGACTCACATT
GAGGGCGGTGATGAACTGTGGCTTCACCACGCGCAGCGAGAAGATCTGCT
GTCCCGTCGAGGATGCCCAGAGCGAGGTGCGGTTAGATCCCACGGCGGCC
ACCACCAGTACAACTACAACTACTACTACTACCAGCACAACATCTACTAC
TACTTCCACCACAACCACCACTACTACCACAACTCCAGCGCCAGAACCTT
GGCTGAGCATATTCAAGACGGATCGCGATTACGTCCAGCAATCCATTGGG
TCCACGCACCGGCCAACGAGGGAGAGCATCACCTTCAGAGACACCTCCGA
TGGCGCCGACTGCACGGCTCCCCTGTACGAGGGCCAGTGTCGTGCCGTAT
CCGCCTGCCCCAGTGTGGAGCCACTCCTGTCGCAGGTCGTCTCAGGACGA
GGATTTCACAACGTGCCGCGAGGGAACGCACGAGGAGATCATCTGCTGTC
CGCTCAATCTGCCGCTGCAGCACGCGTCCACACCGGCTTGCGGCTGGGTG
TCCAGGGTGATTCGTCGGAGGCAAGCTGCCGAGATCGCTAGAGCTGGCGC
ATTGCACCGGGCGGATAGGCTACTGCCACACTACGCATCTGGCTTCGCTG
CAATCGATGCGCTTCGATGCACTGCATCACTGTGCGCTGTACTGACGCCC
AAGCTCTGTCAGGCGCTGCTGCAGCGACAGTCATGCTGTTCGATGCTGTA
TCTGCGACGT
FMO14233.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15046-RA | 1817 | CG15046-RA | 135..1046 | 10..890 | 3755 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18488445..18489155 | 800..100 | 3025 | 97.6 | Minus |
| X | 23542271 | X | 18489396..18489486 | 100..10 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:28:54 has no hits.
FMO14233.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:10 Download gff for
FMO14233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15046-RA | 124..1046 | 1..890 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:07:17 Download gff for
FMO14233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15046-RA | 124..1046 | 1..890 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:07:17 Download gff for
FMO14233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18488334..18489154 | 101..890 | 95 | <- | Minus |
| X | 18489396..18489493 | 1..100 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:10 Download gff for
FMO14233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18382367..18383187 | 101..890 | 95 | <- | Minus |
| arm_X | 18383429..18383526 | 1..100 | 96 | | Minus |
