FMO14234.5prime Sequence
958 bp (854 high quality bases) assembled on 2014-07-25
> FMO14234.5prime
TCAGTCGACATGTTCGCCCGCTGCGCCCTTAGAACCGTGCAGGGGTCATG
GCCCCGATGCAGATACACCGGAATTCAGCCACTTGCCGCCGGTTTCCACG
TGAGCGCTCCGCAAATGGAGCCAAGCAAGCAGACCAAACTTGAGCTAAAG
CGTCGCCTGAAGGCCGAGCAAAAGGCCAAGGAGAAGGCTGAGAAGGCGGC
CGCTGCGCCGGCGGAAAATACTGCTGGCAAGAAGAAGAGCAGTGCCGCCG
AGGAGGAGGAGATCTCGCCGAATGAATACTTTAAGCTGCGCTCCGCCGCC
GTTCAGGAGCTGAAACGTTCACCCGCAACGGATCCCTATCCACACAAGTT
CCATGTGAGTAGCTCGCTGGAAGACTTCATTGCCAAGTACGAGAACAGCC
TCAAGGAGGGCGAGACCCTGGAGAATGTCAAACTGAGCGTGGCTGGGCGC
GTGCATGCCATACGCGAGTCGGGCGCCAAGCTCATTTTCTACGATCTGCG
CGGCGAGGGCGTCAAGGTGCAGGTGATGGCCAGCGCTAAGTCCTACAAGT
CGGAGGCGGATTTCGAAATCGATACGTCCAAATTGCGACGTGGTGATATC
ATCGGCGTTGTCGGACATCCCGGCAAAACCAAGAAGGGTGAACTGTCCGT
TATGCCCAGCGAGATCAAGCTGCTATCGCCCTGTCTACACATGCTGCCCC
ATCTGCATTTCGGGTTGAAGGACAAGGAGACGCGCTACCGCCAGCGCTAT
CTTGATCTCATTCTCAACAACAATGTGCGAGAGAAATTCCAGATCCGTGC
CAAGATCATCTCGTACGTGCGTCAGTTCCTGATCGTTTGGTTTCCCTGAG
ATCGAGAACGCCCATGATGAACATGATCGCCGGTGGAGCACTGCCAAGCC
CTTTCTGGACGCATCCACAATGAACTCAGAATGGATTCTTGTGTTCTATG
CGCAATTG
FMO14234.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:28:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-lys-RC | 2160 | CG12141-RC | 226..1153 | 9..936 | 4385 | 98.5 | Plus |
| Aats-lys-RB | 2223 | CG12141-RB | 289..1216 | 9..936 | 4385 | 98.5 | Plus |
| Aats-lys-RA | 1969 | CG12141-RA | 167..962 | 141..936 | 3725 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9607629..9608292 | 804..141 | 3320 | 100 | Minus |
| X | 23542271 | X | 9608422..9608553 | 140..9 | 660 | 100 | Minus |
| X | 23542271 | X | 9607467..9607569 | 903..803 | 275 | 93.3 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:28:13 has no hits.
FMO14234.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:10:54 Download gff for
FMO14234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-lys-RB | 289..1208 | 9..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:06:21 Download gff for
FMO14234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-lys-RB | 289..1208 | 9..928 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:06:21 Download gff for
FMO14234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9607629..9608292 | 141..804 | 100 | <- | Minus |
| X | 9608422..9608553 | 9..140 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:10:54 Download gff for
FMO14234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9501662..9502325 | 141..804 | 100 | <- | Minus |
| arm_X | 9502455..9502586 | 9..140 | 100 | | Minus |
