FMO14239.5prime Sequence
684 bp (244 high quality bases) assembled on 2014-07-25
> FMO14239.5prime
TCAATCGACATGCCACACAGCCGGATCCATACAATGTGGCCCATTATGAT
AGGTGTAATCATCGCCAGCTCGTGCTGCGTAGACGGCCAGTCCTATCTCT
TCATCGTGGAAAACGTTCTCCACGAGTCCGCCCGCCCACTGCCCTACAAC
TTGACAAACGCCAACGGAACCACCGAGGTGGAATTGTTTCCCGACACCAT
CTCAAACAACACGCGGATTATTGTCTACAAGAACACTGTCGTCGAGTCGC
CCAACGATCTGTCCCAGACGGCAATGGATGTGATCACGATTGTGTGGTAT
GTGCCACTTTCCTGGCCCTGGCCGCCTTCTTCTGCTGATGGCTGTTCGGA
TCGCTATGCCGCGACATGAGGCGTCTCCGCCGGATGCAATCACCGAGTGT
CTGAGGCCCACCCACGACTCGCACCTACAGCGAATTGCCCTCCACTACAT
AAGGATCAGATGCACAGGCCAACGAGCGGCTGGTACCTTCAGACAGGCAG
AGATTGGAGACACGCGGACCCGCCCACTCCACCTTGCGCCATACTGGTGG
TCTCGCATGATGAAGCATACCACTTCAACTTCTTGCCCGGCAGATGCTAT
CTATCTATCTATCTATCCATACAAACTGCTGTATGTGATTACTAAATGCG
GACACTCGAATCAGATTAGCTATGACACCGACAC
FMO14239.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15673-RC | 1143 | CG15673-RC | 243..683 | 9..436 | 1790 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21609779..21609959 | 235..55 | 875 | 98.9 | Minus |
| 2R | 25286936 | 2R | 21608923..21609066 | 375..236 | 505 | 96.5 | Minus |
| 2R | 25286936 | 2R | 21612783..21612829 | 55..9 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:29:14 has no hits.
FMO14239.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:22 Download gff for
FMO14239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15673-RC | 243..703 | 9..451 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:07:48 Download gff for
FMO14239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15673-RC | 243..703 | 9..451 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:07:48 Download gff for
FMO14239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21609779..21609958 | 56..235 | 98 | <- | Minus |
| 2R | 21612783..21612829 | 9..55 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:22 Download gff for
FMO14239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17497284..17497463 | 56..235 | 98 | <- | Minus |
| arm_2R | 17500288..17500334 | 9..55 | 100 | | Minus |
