FMO14240.5prime Sequence
964 bp (863 high quality bases) assembled on 2014-07-25
> FMO14240.5prime
TCAGTCGACATGGCCAGTCATCGAATCATCCAATCTGTCATGTACGCCGG
CAATTTCACCAGCTCAGAATCCGGTTGGCTAATTGGGCAGGAGCACGGAA
TGCAGCATAGCGATGAGTGCATCTTCCAGAGACGAAGGCCCACAGTTGTG
CTCTTTGTGCTCTACGGACTGGCCGTGCCCACCTTGTCGGCCTTTGGACT
GTGTACGAACTTTATCAACGCCGTGGTATTCATGCGTCCCAAGATGACGC
CATCGGCCTTCAGTTACCTGGCGGCCCTTTCGTGGATGGACTGCATCTCA
TGCCTGCTCATCACAATGACTGCCCTGTCCAGGAGCTATTTCTACAGCAG
TCCCACATGGATTACCTACGACTATCAGTGGCAAACGCCACTCTTTGGCA
TCAGCACTGGCGGAGCGAACCTGATTCTAGCGTGTCTGAGCCTGGATAGA
TTCATCTATCTGTCCTGTTTTAAAAGGAACAACGGTGCTCCGCGATTTTG
TCGCCGAAAGGTGGCTCGCTGCATCATTGTTGTGGCAATAGGCATATCCA
TCGTGGTCAATATGCCATACTTTTTCGTCTTCTACGTGAGTGACTCGGGA
ACTTGTCACGTCACAGAATTCTACTACACAAATTTTTATAAAGTTCAAAA
CTGGGTTCACCTTCGCCTTGTTGGGCCCTCCTCCCAGCCATATTTCTGGT
CATCGGCAATGGGGGCCATTATTATAGGCCTTCCGGGAATGGACGAGGCA
AAGTCGTATATGCCAGGCTAACACCCCGCTGCTATAGCCGCACCACTGCC
AAGCGATATCAGCACCAAATGAAGTGACATCAGCATAGTGATGGGGATTA
CATGGTACCTCTTCGGGGGACTTCCCGCACACATGACGTTCCAGGAAAAG
GCTTCTAACCTTTTATTCGGTGGGTGGATGCCACAAGGGGTGGGGATGGA
CTCCCTTCATTTGG
FMO14240.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15614-RA | 1524 | CG15614-RA | 13..942 | 8..938 | 4175 | 97.3 | Plus |
| CG34190-RA | 1100 | CG34190-RA | 906..1035 | 938..810 | 335 | 87.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16945567..16946191 | 8..632 | 3125 | 100 | Plus |
| 2R | 25286936 | 2R | 16946257..16946434 | 633..812 | 580 | 95.6 | Plus |
| 2R | 25286936 | 2R | 16946520..16946601 | 810..889 | 240 | 89 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:29:18 has no hits.
FMO14240.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:24 Download gff for
FMO14240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15614-RA | 3..945 | 1..943 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:07:52 Download gff for
FMO14240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15614-RA | 3..945 | 1..943 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:07:52 Download gff for
FMO14240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16945557..16946191 | 1..632 | 99 | -> | Plus |
| 2R | 16946257..16946434 | 633..812 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:24 Download gff for
FMO14240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12833062..12833696 | 1..632 | 99 | -> | Plus |
| arm_2R | 12833762..12833939 | 633..812 | 95 | -> | Plus |
