FMO14242.5prime Sequence
1001 bp (869 high quality bases) assembled on 2014-07-25
> FMO14242.5prime
TCAGTCGACATGATCTTGCGAACGCCACTCGTTGCCGGCCACCAGCTGCA
GCTGCTCCTGCTGCCCTCCGTCCTGCTCCTCATGCTCCATCTTCTTCTCT
GCGATGCAAAGACGGTCAATCCCGGTGATTCCATGCAGATGCAGCATCAC
CAGATGACCGCGGAGCCGGGACTGCCGGAACCCAGGGCCTACATGCCGGA
TGCCCAGCATCTGGACTTTGTCTACCACGATCACGAGGAGCTCACAAGAT
TCCTTAGAGCCACCAGTGCGAGGTACCCCAATCTCACTGCCTTGTACTCC
ATCGGAAAATCCATCCAGGGACGTGATCTTTGGGTAATGGTGGTCAGCTC
GTCGCCATATGAGCACATGGTGGGTAAGCCGGATGTGAAGTACGTGGGCA
ATATCCACGGAAACGAGCCAGTCGGCCGGGAGATGCTGCTCCACCTCATC
CAGTATTTCGTGACCAGCTACAACACGGATCAGTACGTCAAATGGCTGCT
GGACAACACACGGATTCACATTCTGCCCACAATGAATCCGGATGGTTATG
CGGTTTCCAAGGAGGGCACATGCGATGGTGGCCAAGGAAGATATAATGCC
CGTGGATTCGATCTGAATCGCAACTTTCCCGACTATTTCAAGCAGAACAA
CAAACGGGGTCAGCCAGAAACGGATTCGGTAAAGGATTGGATATCCCAGA
TTCAGTTCGTGCTCAGTGGAAGCCTGCATGGTGGTGCCCTGTGGCCAGTT
ATCCGTACGACAATACGCCGAACTCCAGTCCTTTGGGCGCAGTGTTCCAG
ACCTACTCGGCGGCGCCATCGCTGACGCCCGACGATGATGTGTTCAGCAC
CTGTCCCTGTCTATGCCCGCACATGCAAGAATGTCCAGGGGCGTCGCTGC
AAGTCAGCGACGCCGGCTTCGAGACGGCAATCACCACCGAAGCCGCCTGG
TTATCCACTTGCATCGGCGGAAATGCCGGACCTACAACCCTAATGTGTGT
G
FMO14242.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4678-RF | 1875 | CG4678-RF | 249..1230 | 9..988 | 4480 | 97.9 | Plus |
| CG4678-RD | 2007 | CG4678-RD | 289..1270 | 9..988 | 4480 | 97.9 | Plus |
| CG4678-RI | 1952 | CG4678-RI | 249..1215 | 9..988 | 4245 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16708156..16708491 | 255..590 | 1680 | 100 | Plus |
| X | 23542271 | X | 16707686..16707934 | 9..257 | 1245 | 100 | Plus |
| X | 23542271 | X | 16708549..16708740 | 589..779 | 895 | 99 | Plus |
| X | 23542271 | X | 16709359..16709538 | 778..951 | 500 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:29:27 has no hits.
FMO14242.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:28 Download gff for
FMO14242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4678-RD | 285..1264 | 6..981 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:01 Download gff for
FMO14242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4678-RD | 285..1264 | 6..981 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:01 Download gff for
FMO14242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16709359..16709564 | 778..981 | 91 | | Plus |
| X | 16707682..16707934 | 6..257 | 99 | -> | Plus |
| X | 16708159..16708491 | 258..590 | 100 | -> | Plus |
| X | 16708551..16708738 | 591..777 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:28 Download gff for
FMO14242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16601715..16601967 | 6..257 | 99 | -> | Plus |
| arm_X | 16603392..16603597 | 778..981 | 91 | | Plus |
| arm_X | 16602192..16602524 | 258..590 | 100 | -> | Plus |
| arm_X | 16602584..16602771 | 591..777 | 98 | -> | Plus |
