FMO14245.5prime Sequence
616 bp (616 high quality bases) assembled on 2014-07-25
> FMO14245.5prime
TCAGTCGACATGTGGAAAATTAACCTTGTGCCCACAATGGGCACCGAAAA
GAAAAAACACCCGCCAAAAAAGAAGTCACAGGAGAAAAAAAAGAGCGGTC
ATAGCAAGTCGAAGCAGAATTCTTTGAATTCCAATCTGCCCAAGATATGT
TTCGTCATAGCAATTTTCGATCTGCTGCATGCGTTATATTTTACAGTTCA
AGCAATGATTCTTCTGGTTAAACAGTTCAGCGCGTTTGCTATGTTGGCGC
TTTTGGGTGTCATTTTTTGGGTTATAATGGTCATCCTGTTGATGGTTGGC
CTTTATAAGCGCAAGCCAGTTTTCGTAAGGTATTGGCTTATATTTTCCAT
AGTCGGCTTTATAACCGATATTCTATTTCTACTTTGGGGCATTGCGACCT
CAATAACTGTGGACTGGGACCGTCTTAATGAGTTTTCAATAATTTTCCTT
GGAATATTTGTTGAAAGCGCCTGCATATATTTCATACATCGGTACTATCA
GATTATGGATGAATCGAAAAAGAAGAGGACCCTATGTTGTGGGCGGAAAA
AACGAAAAGAAAAAGTCTAAAAGCCCAAAAAAGAAGAAAGGCAAAAAAGC
AAGCTTTCTAGACCAT
FMO14245.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42535-RA | 674 | CG42535-RA | 16..605 | 10..598 | 2890 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10630703..10630920 | 225..10 | 1025 | 99.1 | Minus |
| 3L | 28110227 | 3L | 10630353..10630502 | 457..308 | 750 | 100 | Minus |
| 3L | 28110227 | 3L | 10630558..10630643 | 309..224 | 430 | 100 | Minus |
| 3L | 28110227 | 3L | 10630213..10630295 | 540..458 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:29:40 has no hits.
FMO14245.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:33 Download gff for
FMO14245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42535-RA | 9..616 | 1..608 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:16 Download gff for
FMO14245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42535-RA | 9..616 | 1..608 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:16 Download gff for
FMO14245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10630092..10630161 | 539..608 | 93 | <- | Minus |
| 3L | 10630215..10630295 | 458..538 | 100 | <- | Minus |
| 3L | 10630353..10630500 | 310..457 | 100 | <- | Minus |
| 3L | 10630558..10630641 | 226..309 | 100 | <- | Minus |
| 3L | 10630703..10630927 | 1..225 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:33 Download gff for
FMO14245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10623453..10623600 | 310..457 | 100 | <- | Minus |
| arm_3L | 10623658..10623741 | 226..309 | 100 | <- | Minus |
| arm_3L | 10623192..10623261 | 539..608 | 93 | <- | Minus |
| arm_3L | 10623315..10623395 | 458..538 | 100 | <- | Minus |
| arm_3L | 10623803..10624027 | 1..225 | 97 | | Minus |
