FMO14247.5prime Sequence
1012 bp (926 high quality bases) assembled on 2014-07-25
> FMO14247.5prime
TCAGTCGACATGTCCTATTGGCGTTTGTTGTGGCTGGCGCTCAAAATGAT
TTACCAGCTGCTGTGCTGCTCCGTGAGTCTGATCTTCTTCTGCTTCAACG
TATTCTGGCTCTTTTGCAACCTGGCCATCCCGTGGTGCACTCTTACCTTG
CTCGTTGTGTGCATCGCCTCCAAGTTCGTCAAACTGCAACGAAGTCCCAA
CGAGAAGCGACTCCTAAGCCTTCTGAGTTCTCCAGAGGAATGGCCCAGTT
ACTGGCCAATCGCCAACCGGGCAGCCGGCTTTGATGCGCCCGAAAACTCC
AAGGCAGCCATTAAGAAGTGCCTCGCACGTGGATATCGGAACGTGCTTCT
GGATGCCGGCCTCACGTCCTGTGGTGAAATAGTCGTGGCTAACCCCACAA
AAATAAACGTTGCACAGCCGCTTGTGGAGTTGCAAAAGCTAAACATCACG
GAGCAACACCCGATGGGGTCGCAGTACGAAGCGGAAACGGTGGCTCCCCT
CAGGCAATTGTCCGATTTCCTGGAGGCAGAGGCTGCTGAGACCACAGTGT
TTTTGCGTCTGCACGACAACAGCGCCAGGATGATAAACGAACTGCAGAAG
TTTATGACTGCTGACGAGTCGTTCACCCAGCGCACAATTGTCATCAGTCG
ATCACCACTAGCGATTTACCAGCTCCGAAAACTTAAGCCCGAAATAATTT
GTGGGCCTTTGGCACGAGACCTATTTGTCACTGGCCATCCTCAAGTCTTC
TACACTTATTACCTCAATCTATGGCGCTATTTTTCGCAACATAATTGCAC
CCGTGATAGGAATAAGCGTAGTTTTTCTCAGCAAGATGAGATTAACTTCA
CATTGCGATCTTGGCGCACGTGGGTGTCGTCCATAGTCTATATGTACTCA
CCACGAGAAAAGATACTCCAAGACATGAGATCCAGTACCTACGGACTCGT
TGCGTCGAGCCGCACCTACCTTTATGAAAGGCCGCAGCTTTCTAGAACAA
TTCGTTGCGCGC
FMO14247.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14883-RA | 1838 | CG14883-RA | 276..1263 | 10..980 | 4405 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:28:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16456411..16456719 | 10..318 | 1545 | 100 | Plus |
| 3R | 32079331 | 3R | 16457001..16457206 | 467..672 | 1030 | 100 | Plus |
| 3R | 32079331 | 3R | 16457264..16457442 | 670..848 | 800 | 98.9 | Plus |
| 3R | 32079331 | 3R | 16456794..16456946 | 317..469 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:29:00 has no hits.
FMO14247.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:15 Download gff for
FMO14247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14883-RA | 268..1269 | 1..987 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:07:27 Download gff for
FMO14247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14883-RA | 268..1269 | 1..987 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:07:27 Download gff for
FMO14247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16456403..16456719 | 1..318 | 98 | -> | Plus |
| 3R | 16456796..16456944 | 319..467 | 100 | -> | Plus |
| 3R | 16457002..16457206 | 468..672 | 100 | -> | Plus |
| 3R | 16457267..16457442 | 673..848 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:15 Download gff for
FMO14247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12282989..12283164 | 673..848 | 98 | -> | Plus |
| arm_3R | 12282125..12282441 | 1..318 | 98 | -> | Plus |
| arm_3R | 12282518..12282666 | 319..467 | 100 | -> | Plus |
| arm_3R | 12282724..12282928 | 468..672 | 100 | -> | Plus |
