FMO14248.5prime Sequence
624 bp (624 high quality bases) assembled on 2014-07-25
> FMO14248.5prime
TCAGTCGACATGCTGCAACTTCAAAAGATGAATACTCTGCTGCTGCTCTT
GGCCATGATGCGCTGCATCTGTGCCACGCCCATAGCTCCTGCCACGCCCG
ATGGCGCCACGCCCATCGACGCCCGCGTCTCGGCCGCCGACTTCGGAGCC
CAGGATGCTTTCGATGCCGCCGACAGCTCCGCGGAATCCACCCACGCGCA
GGCCAGCGACGCCGGGTTCAAGATCTCTCTCCTGCCCACTCCGGCTAAAA
CGGCGGAATCGGTGAATCTAGAGCAGGAGGCCATTCCCTCGAAGGTGCTG
AGCGTGTACGACAACAGTCAAAAGAGGCTGGCCGATTTGGCGCAGCCCGT
TCCCATTTTGGACTCCATCAGTGAGCACGAGAAGTACGGCAACAACGGTG
ACATGTTCGACGGCATCTCGCGATCCATTGTCAACGGCTACGAGGCCTTT
TCCAACCTGCTCAACACCTTTATTCAGGTGAGGGAGTGCCGAAATTGCGA
CCATTGTGTTTGGTTTGTTTGTTTGCCCTGTTTCTTGGTCAATCCATTCG
CACACACGTTGCATAATGGTCCCAGCGATGCACCGGCTCAGCAGCCAAAC
AAAATTGCAAGCTTTCTAGACCAT
FMO14248.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5928-RC | 1182 | CG5928-RC | 134..730 | 10..606 | 2985 | 100 | Plus |
| CG5928-RA | 806 | CG5928-RA | 134..601 | 10..477 | 2340 | 100 | Plus |
| CG5928-RB | 863 | CG5928-RB | 402..658 | 221..477 | 1285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6068549..6068812 | 343..606 | 1320 | 100 | Plus |
| X | 23542271 | X | 6068091..6068303 | 10..222 | 1065 | 100 | Plus |
| X | 23542271 | X | 6068359..6068483 | 221..345 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:29:04 has no hits.
FMO14248.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:17 Download gff for
FMO14248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5928-RC | 128..727 | 10..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:07:32 Download gff for
FMO14248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5928-RC | 134..733 | 10..610 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:07:32 Download gff for
FMO14248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6068361..6068483 | 223..345 | 100 | -> | Plus |
| X | 6068552..6068815 | 346..610 | 99 | | Plus |
| X | 6068091..6068303 | 10..222 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:17 Download gff for
FMO14248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5962124..5962336 | 10..222 | 100 | -> | Plus |
| arm_X | 5962394..5962516 | 223..345 | 100 | -> | Plus |
| arm_X | 5962585..5962848 | 346..610 | 99 | | Plus |
