Clone FMO14251 Report

Search the DGRC for FMO14251

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:142
Well:51
Vector:pMK33-CFH-BD
Associated Gene/Transcriptl(3)72Dp-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14251.5prime Sequence

952 bp (848 high quality bases) assembled on 2014-07-25

> FMO14251.5prime
TCAGTCGACATGCAGAAGTTCTCGATCAGCTTGCTGATCTTCATCGGAGC
TCTGTTGGCCGCTTCAGAGGCTGGCATCTCATCGCCCATCATAGGGGTTC
TCACACAGGAAGTTTACGTCGATGGTTTGATCTCGAGACATTTTGATAAC
AAGACCAGCTATATTGCCGCCTCGTATGTGAAGTATCTCGAAGGAGCTGG
AGCCCGAGTAGTGCCGATTTGGATCGGTCGCAATCGCAGCTACTACGACG
ATCTCATGCGCAAGATAAATGGAGTCTTGTTGCCCGGTGGAGCCACTTGG
TTTAATCAGAGTAATGGGTATGCGGATGCGGGCGAACACCTCATCCACTT
GGCCATTGAACTAAATGATCAGGGCGTCTTTATGCCGGTGTGGGGCACTT
GTCTGGGCATGGAACTATTGGTTTACAAGCTGGCCAACGAAACGGAACAC
CGCATTAATTGCGAAGCGACCGGCATGGCCGTGCCTATGGAGTTTAAAGA
AGACTATAAGAAGAGCCGCCTGTTTGCATCCATCACCGATGATGTGGTGG
ACACCATGGTCAAAGAGAATGTGACCTATCACTGGCATCAGTTCTGCTAT
ACGGAAAAAGACTTCGAGCGGGATCTACTAAACGAAACTTGGCGGGTTAT
GTCCCTAAATCATGACTGGAATGGCGTTGAGTTTATTTCCACCGTAGAGC
ACATAAAGTACCCCTTCTATGGAGTACAATTCCATCCGGAGAATCCGCTG
TACGAGTTTACAAGACAGCATTCCCCATACCGCAGCTGCTGTGTTAAGTG
TCAATTCTTCGCCGATTTCTTTGTGAGTGAGGCGAGGGGAGGAGTAATCA
GAGCTTTTCGAATGCCCCGGAGCAGGCCAGGACGCCTCATCTACAATATA
GCCGAATATACTTCGATTCTGGCTCCCTCGTACATACACGCAATACTAAT
TA

FMO14251.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
l(3)72Dp-RA 2517 CG32155-RA 638..1576 10..946 4360 98.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16235611..16236051 501..938 1710 95.5 Plus
3L 28110227 3L 16235318..16235552 268..502 1160 99.6 Plus
3L 28110227 3L 16234777..16234989 10..222 1050 99.5 Plus
3L 28110227 3L 16235211..16235262 221..272 260 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:29:59 has no hits.

FMO14251.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:42 Download gff for FMO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
l(3)72Dp-RA 638..1581 10..951 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:27 Download gff for FMO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
l(3)72Dp-RA 638..1581 10..951 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:27 Download gff for FMO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16235323..16235552 273..502 100 -> Plus
3L 16235613..16236063 503..951 96   Plus
3L 16234777..16234988 10..221 99 -> Plus
3L 16235212..16235262 222..272 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:42 Download gff for FMO14251.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16227877..16228088 10..221 99 -> Plus
arm_3L 16228312..16228362 222..272 100 -> Plus
arm_3L 16228423..16228652 273..502 100 -> Plus
arm_3L 16228713..16229163 503..951 96   Plus