FMO14251.5prime Sequence
952 bp (848 high quality bases) assembled on 2014-07-25
> FMO14251.5prime
TCAGTCGACATGCAGAAGTTCTCGATCAGCTTGCTGATCTTCATCGGAGC
TCTGTTGGCCGCTTCAGAGGCTGGCATCTCATCGCCCATCATAGGGGTTC
TCACACAGGAAGTTTACGTCGATGGTTTGATCTCGAGACATTTTGATAAC
AAGACCAGCTATATTGCCGCCTCGTATGTGAAGTATCTCGAAGGAGCTGG
AGCCCGAGTAGTGCCGATTTGGATCGGTCGCAATCGCAGCTACTACGACG
ATCTCATGCGCAAGATAAATGGAGTCTTGTTGCCCGGTGGAGCCACTTGG
TTTAATCAGAGTAATGGGTATGCGGATGCGGGCGAACACCTCATCCACTT
GGCCATTGAACTAAATGATCAGGGCGTCTTTATGCCGGTGTGGGGCACTT
GTCTGGGCATGGAACTATTGGTTTACAAGCTGGCCAACGAAACGGAACAC
CGCATTAATTGCGAAGCGACCGGCATGGCCGTGCCTATGGAGTTTAAAGA
AGACTATAAGAAGAGCCGCCTGTTTGCATCCATCACCGATGATGTGGTGG
ACACCATGGTCAAAGAGAATGTGACCTATCACTGGCATCAGTTCTGCTAT
ACGGAAAAAGACTTCGAGCGGGATCTACTAAACGAAACTTGGCGGGTTAT
GTCCCTAAATCATGACTGGAATGGCGTTGAGTTTATTTCCACCGTAGAGC
ACATAAAGTACCCCTTCTATGGAGTACAATTCCATCCGGAGAATCCGCTG
TACGAGTTTACAAGACAGCATTCCCCATACCGCAGCTGCTGTGTTAAGTG
TCAATTCTTCGCCGATTTCTTTGTGAGTGAGGCGAGGGGAGGAGTAATCA
GAGCTTTTCGAATGCCCCGGAGCAGGCCAGGACGCCTCATCTACAATATA
GCCGAATATACTTCGATTCTGGCTCCCTCGTACATACACGCAATACTAAT
TA
FMO14251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)72Dp-RA | 2517 | CG32155-RA | 638..1576 | 10..946 | 4360 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16235611..16236051 | 501..938 | 1710 | 95.5 | Plus |
3L | 28110227 | 3L | 16235318..16235552 | 268..502 | 1160 | 99.6 | Plus |
3L | 28110227 | 3L | 16234777..16234989 | 10..222 | 1050 | 99.5 | Plus |
3L | 28110227 | 3L | 16235211..16235262 | 221..272 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:29:59 has no hits.
FMO14251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:42 Download gff for
FMO14251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)72Dp-RA | 638..1581 | 10..951 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:27 Download gff for
FMO14251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)72Dp-RA | 638..1581 | 10..951 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:27 Download gff for
FMO14251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16235323..16235552 | 273..502 | 100 | -> | Plus |
3L | 16235613..16236063 | 503..951 | 96 | | Plus |
3L | 16234777..16234988 | 10..221 | 99 | -> | Plus |
3L | 16235212..16235262 | 222..272 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:42 Download gff for
FMO14251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16227877..16228088 | 10..221 | 99 | -> | Plus |
arm_3L | 16228312..16228362 | 222..272 | 100 | -> | Plus |
arm_3L | 16228423..16228652 | 273..502 | 100 | -> | Plus |
arm_3L | 16228713..16229163 | 503..951 | 96 | | Plus |