FMO14253.5prime Sequence
1013 bp (930 high quality bases) assembled on 2014-07-25
> FMO14253.5prime
TCAGTCGACATGACCTACGACGAGCGCAGTAGTGATGGCAGCAGCTCTAG
CGAAACACATGATTCCTTCGCCCACCTGCTGGCAACCAAGCAGGGCCAAT
CCCAGACACCGGCCACAGCGATGCCCAAACACATTCCCTTCCCGGAGCAC
GCCACCACATCCGAGTGGCTCAGCGAACTCATCATGTGCGCCTTTACCAT
GGGTTCGGCCATCGTACAGTTCATCAACATCTATAGAACCAACTGGTGGC
TGCCACAGGCGCACACCAGGCATATGGTGAACATCGAGCTGATCGATCCT
TATCTTCGCTATCTACTGCTCATACTCAATACGCGGAGACTGATTTACTG
CTTGCTGCTGGTGAAGATCAGGAAAAGAAACGAGAAGAGCCGGCATCTTA
TCCGACTGGGAATCAAGTACGGATTTGGAGGCCTTGTTCAGCTATCCTTG
GGTTTCTGCGCCATGAAGCTATACCAGAAGCACACATACATACTCCTTCT
CTTCTTATTCTATCCTGTGGTCATCTACCTGTTGATCTTCGGCTTCCAGC
TTGAACCCTTCCTGCGCACACGATTCGAACTGCCGGGCGTGTATATCAAC
GACCTACCGGTCCATAGTTGCACCACCAATCCGGTTAACATAAGGACGAA
GTGGAAACACTCCGACATGACTTCAATAAGCGATTCAAGCAGCTTATCTT
CACCTCCATGCTGAATGCTTACTACACTGGCCTGTGCCCTGCTGTCTGGC
GTCAGTGTCCAATACAATGTACTCCGAGCAGCCCAGCACTGTATCATTGT
GTGCCTGGGCGCTTTCAGTCTGTGTGCTGTTTTCTATATCCTGCCAAGTA
TAGTGATACATTACATCGGCTACTTTACATTTGGGCTGCTGGCAGCGCAT
GGACGGAGCAGCGCCTTCGCAGCTAATAGTAGCGCAGTGCGCTTCACCTG
GGTCGAAATACTCTCCTACAACCACGGACACCTGTAAAGACACACCCGGA
GGCCTGTACAGAA
FMO14253.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:30:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13016-RA | 1475 | CG13016-RA | 101..1117 | 5..1013 | 4625 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14158495..14158965 | 516..977 | 1760 | 96.4 | Plus |
| 2R | 25286936 | 2R | 14157862..14158136 | 5..279 | 1360 | 99.6 | Plus |
| 2R | 25286936 | 2R | 14158204..14158440 | 279..515 | 1185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:30:05 has no hits.
FMO14253.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:46 Download gff for
FMO14253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13016-RA | 97..1117 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:31 Download gff for
FMO14253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13016-RA | 97..1117 | 1..1013 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:31 Download gff for
FMO14253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14157858..14158136 | 1..279 | 98 | -> | Plus |
| 2R | 14158205..14158440 | 280..515 | 100 | -> | Plus |
| 2R | 14158495..14159000 | 516..1013 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:46 Download gff for
FMO14253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10045363..10045641 | 1..279 | 98 | -> | Plus |
| arm_2R | 10045710..10045945 | 280..515 | 100 | -> | Plus |
| arm_2R | 10046000..10046505 | 516..1013 | 96 | | Plus |
