FMO14255.5prime Sequence
989 bp (877 high quality bases) assembled on 2014-07-25
> FMO14255.5prime
TCAGTCGACATGGAGCGCAGTCATTTGCCGGAGACGCCATTCGACCTGGC
CCATTCTGGGCCCAGGTTTCAGGCCCAGTCGAGTGGCAATGGTTCCGTGC
TGGACAATGTGCTGCCCGACATGGCGCACCTGGTGAACCCCTACTGGAGC
CGCTTTGCGCCCATGGATCCCATGATGAGCAAAATTCTGGGATTGTTCAC
CCTGGCCATTATGATCATCTCGTGCTGCGGCAACGGAGTGGTGGTCTACA
TTTTCGGTGGAACAAAGTCGCTGCGCACGCCGGCAAATTTGCTCGTTCTC
AACCTGGCCTTCTCCGACTTCTGTATGATGGCCTCCCAGTCGCCGGTGAT
GATTATTAACTTCTACTACGAGACTTGGGTGCTGGGTCCGCTGTGGTGCG
ACATCTACGCGGGATGTGGCTCGCTCTTTGGCTGTGTGTCCATCTGGTCC
ATGTGCATGATTGCCTTCGATCGGTACAATGTGATAGTGAAGGGTATCAA
TGGCACACCCATGACCATCAAGACGTCTATAATGAAGATACTTTTCATCT
GGATGATGGCTGTCTTTTGGACTGTCATGCCATTGATTGGATGGAGCGCC
TATGTGCCCGAGGGCAATCTGACTGCCTGCAGCATTGACTATATGACGCG
TATGTGGAACCCGCGATCTTATTTAATCACCTACTCCCTCTTCGTTTACT
ACACTCCACTGTTTCTCATCTGCTACTCCTACTGGTTCATCATTGCCGCC
GTGTCAGCACATGAAAAAGCGATGCGGGAACAGCCAGAGATGAATGTGAA
TCCCTGCGAGCTCTGAGATTGCGACAAGTGCCGAGGAAACTGCCAGTGCT
CTACTACATCTCCCTATGTTTATGCATGACACATACTTGTCATTGCTACT
TCGACTCTCAAAATCGACGGATGACCCACTGACGACACATTGGGAGCGAC
TTCCGCAACGAGCGCAGCCTCACATCCGAATTGTGTCCG
FMO14255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:30:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rh2-RA | 1365 | CG16740-RA | 55..1061 | 9..986 | 4190 | 96.2 | Plus |
| ninaE-RA | 1588 | CG4550-RA | 372..955 | 226..805 | 360 | 72 | Plus |
| Rh6-RB | 1474 | CG5192-RB | 516..593 | 417..494 | 180 | 83.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18899673..18900347 | 109..783 | 3360 | 99.9 | Plus |
| 3R | 32079331 | 3R | 18899477..18899579 | 9..111 | 515 | 100 | Plus |
| 3R | 32079331 | 3R | 19887504..19887772 | 494..226 | 295 | 74 | Minus |
| 3R | 32079331 | 3R | 19887077..19887222 | 746..601 | 235 | 77.4 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:30:12 has no hits.
FMO14255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:49 Download gff for
FMO14255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rh2-RA | 47..1029 | 1..956 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:34 Download gff for
FMO14255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rh2-RA | 47..1029 | 1..956 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:34 Download gff for
FMO14255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18899469..18899576 | 1..108 | 96 | -> | Plus |
| 3R | 18899673..18900547 | 109..956 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:49 Download gff for
FMO14255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14725191..14725298 | 1..108 | 96 | -> | Plus |
| arm_3R | 14725395..14726269 | 109..956 | 96 | | Plus |
