FMO14257.5prime Sequence
1015 bp (910 high quality bases) assembled on 2014-07-25
> FMO14257.5prime
TCAGTCGACATGTCTGACGTGTTCATCGTGTCCGCCGCCCGCACGCCCAT
TGGTAGCTTCAATGGAACGCTTTCTAAACTGAAGGCCTCCGACCTGGGCA
GCGTGGTCATCCAGGAGGTACTCCGGCGGGCGAATGTGGAGGGCCAGGAG
GTCAACGAAGTCATCTTGGGCCAGGCTCTAAGCGCCGGTCAGGGTCAGAA
TCCAGCACGTCAGGCTTCACTCAAGGCGGGTCTGCCCATTCAGGTGCCAG
CCTACGGCATAAACATGCTATGTGGTTCCGGCTTAAAAACTGTAGCGCTG
GGTTACCAGGCCATCCGCTCGGGAGACGCACAGATTGTTGTGGCAGGAGG
TCAGGAGAGCATGTCCCTGGCTCCACACGTCATGCATCTGCGGCAGGGCG
TCAAAATGGGTCCGGGCACTATGGTGGACTCGATGATCCACGACGGCCTA
ACCGATGCCATGGAGAACATACACATGGGCATCACTGCCGAGAATCTGGC
CGATAAGTATAACATCAGTCGTGAGGCCCAGGATGCCTATGCCGTGCTGT
CGCAAAATCGAGCCGAGGAGGCCCAAAAAAAGGGTTACTTCGACAAGGAG
ATTGTGCCCGTGGAGATCAAGGATCGCAAGGGTACGACCACATTCAGCAA
GGATGAGTACATCAAGGCGGGCAGCACCGTCGAGGGTATACAGAAGCTCA
GGGCAGCCTTCAAAGAGGGCGGCTCTATAACCGCTGGCAATGCCTCAGCG
TCAACGACTCCGCTGCTGCCGTACTACTGATGTCCGGCGAGGAGGTGGCC
AGGAAGGGTCTTAGCCGCTGGCTAGGATTGTGGGCTGGACTCAGAGTGGC
ATTGAGCCAAAGTGATGGGACTGGGACCAGTCACAGCTGTGGAAGCATTG
CTTCAAAGATTACTGGAAGCGTTGAGGGAAGTGGATCTTACGAGCTGAAC
GAGGCATTCGCCCGCCCAATCACATGGCTGTTCCTGCAGACCTGCACACC
TGATGATCGAAAGTA
FMO14257.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:30:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9149-RA | 1439 | CG9149-RA | 108..1096 | 10..996 | 4655 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1303548..1303978 | 288..718 | 2155 | 100 | Plus |
| 3L | 28110227 | 3L | 1304036..1304223 | 716..900 | 790 | 98.4 | Plus |
| 3L | 28110227 | 3L | 1303187..1303310 | 52..175 | 620 | 100 | Plus |
| 3L | 28110227 | 3L | 1303379..1303493 | 173..287 | 575 | 100 | Plus |
| 3L | 28110227 | 3L | 1303051..1303096 | 10..55 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:30:20 has no hits.
FMO14257.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:52 Download gff for
FMO14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9149-RA | 100..1107 | 2..1008 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:38 Download gff for
FMO14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9149-RA | 100..1107 | 2..1008 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:38 Download gff for
FMO14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1303043..1303093 | 2..52 | 92 | -> | Plus |
| 3L | 1303188..1303309 | 53..174 | 100 | -> | Plus |
| 3L | 1303381..1303493 | 175..287 | 100 | -> | Plus |
| 3L | 1303548..1303977 | 288..717 | 100 | -> | Plus |
| 3L | 1304038..1304223 | 718..900 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:52 Download gff for
FMO14257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1303043..1303093 | 2..52 | 92 | -> | Plus |
| arm_3L | 1303188..1303309 | 53..174 | 100 | -> | Plus |
| arm_3L | 1303381..1303493 | 175..287 | 100 | -> | Plus |
| arm_3L | 1303548..1303977 | 288..717 | 100 | -> | Plus |
| arm_3L | 1304038..1304223 | 718..900 | 98 | -> | Plus |
