FMO14258.5prime Sequence
869 bp (821 high quality bases) assembled on 2014-07-25
> FMO14258.5prime
TCAGTCGACATGTTTCATTTGAAGCGGGAACTGAGTCAAGGCTGCGCCTT
GGCCCTCATCTGCCTGGTGTCCCTCCAGATGCAGCAGCCCGCCCAGGCGG
AGGTGTCCTCGGCTCAAGGCACTCCCCTGAGCAATCTCTATGATAATCTG
CTGCAGCGCGAGTACGCCGGACCCGTCGTCTTTCCCAACCACCAGGTGGA
GCGTAAGGCACAGCGCTCACCCTCTCTGCGCCTGCGATTCGGACGCAGTG
ATCCGGACATGCTGAACAGCATTGTGGAAAAGCGTTGGTTCGGCGACGTC
AACCAAAAGCCCATCAGGTCACCATCCCTGCGTCTGCGCTTCGGCAGGCG
GGATCCCAGTCTGCCGCAGATGCGGAGGACCGCCTATGATGACCTCCTGG
AGCGGGAGCTCACCCTCAACAGCCAGCAGCAGCAGCAGCAGTTGGGTACC
GAGCCGGACTCCGATCTGGGTGCCGACTACGACGGACTGTACGAGCGAGT
GGTGCGGAAGCCACAACGACTTCGCTGGGGACGCAGTGTTCCTCAGTTCG
AGGCAAACAACGCGGACAATGAACAAATTGAACGATCGCAATGGTACAAC
TCGCTTTTGAACTCGGACAAGATGCAGCGAATGCTAGTGGCCCTCCAGCA
GCAGTACGAAATTCCGGAGAACGTGTCCAGCTATGCCAACGATGAGGACA
CTGATACGGATCTGAATAACGATACGTCAGAGTTCCAAAGGGAAGTCCGT
AAACCAATGCGCTTGCGATGGGGCAGGAGCACTGGCAAAGCTCCGTCAGA
GCAAAAGCATACTCCCGAGGAAACTCATCCATCCCATCAAAGACACAGAA
CGCAAGCTTTCTAGACCAT
FMO14258.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:29:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sNPF-RB | 2447 | CG13968-RB | 452..1294 | 10..851 | 4100 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20054277..20054736 | 117..576 | 2270 | 99.6 | Plus |
| 2L | 23513712 | 2L | 20054879..20055109 | 577..807 | 1110 | 98.7 | Plus |
| 2L | 23513712 | 2L | 20054113..20054222 | 10..119 | 550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:29:43 has no hits.
FMO14258.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:36 Download gff for
FMO14258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sNPF-RB | 443..1304 | 1..861 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:18 Download gff for
FMO14258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sNPF-RB | 443..1304 | 1..861 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:18 Download gff for
FMO14258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20054104..20054221 | 1..118 | 96 | -> | Plus |
| 2L | 20054279..20054736 | 119..576 | 99 | -> | Plus |
| 2L | 20054879..20055109 | 577..807 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:36 Download gff for
FMO14258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20054104..20054221 | 1..118 | 96 | -> | Plus |
| arm_2L | 20054279..20054736 | 119..576 | 99 | -> | Plus |
| arm_2L | 20054879..20055109 | 577..807 | 98 | -> | Plus |
