FMO14261.5prime Sequence
718 bp (568 high quality bases) assembled on 2014-07-25
> FMO14261.5prime
TCAGTCGACATGAGCTGCGGCACGAAGGCATTGAAGGTGTCCTCCTTCGT
TTTGGACTTTCTGTGCTGTGTTCTGGCGGCACTGACCATCGCGGCTTGCT
CCTATGCCCTGATTGCTTTTAGCCACAGCGTAGCCATCCGGGTGCCCAGC
ATCCTGGGCATCGTCCTGGGCGGCCTGCTGTTCTTCAGCACGATCTTCGG
CTGCATTGCTGCCCTGCGGGAGAGTATTCGCATGACCTGGATCTATGCCG
CAATACTGCTGGCCCTGGTTTTCAGTCAGATCACCGTCATCTTGGCCCAA
CCCATCAACTATGAGCTGCTGGCCAACGAGACCATTTACGACGCCTGGCA
GGGACAACTTTACCACTCGGACAGAATGTCCTACTTTGAGATCAAGTATC
ACTGCTGCGGACAGACGGGGGCCCGCAAACTATCCGGATAGTGGCCTGGT
GATTCCGCAAAGCTGCTACTTCAACCCAGAACGCCACGGTGACTACGGGA
TCTCTATACGGGTTGGGTTGTAAACAATCAGTTGGGCAGCGGGCTTTCGT
CAAGGGGAACTCGCTGGGAGAAGAATCACGGATTGGGTCGGTTGGTGGGG
TGGGGGGGATAACTCCACTGGTCATTCATTCGCCCGGACTTCCTGGCTTA
TAACCTTAACAGAATGGCCGGAGCGGCCGCCGTTCTTTAACCGAAGCAAG
GCTTTTCTTAGGACCATT
FMO14261.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsp42Eq-RA | 1077 | CG12832-RA | 72..724 | 10..689 | 2650 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7063195..7063368 | 243..70 | 870 | 100 | Minus |
| 2R | 25286936 | 2R | 7062965..7063117 | 396..244 | 765 | 100 | Minus |
| 2R | 25286936 | 2R | 7062602..7062783 | 586..395 | 440 | 91.7 | Minus |
| 2R | 25286936 | 2R | 7063437..7063498 | 71..10 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:30:35 has no hits.
FMO14261.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:11:59 Download gff for
FMO14261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsp42Eq-RA | 65..654 | 2..603 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:45 Download gff for
FMO14261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsp42Eq-RA | 65..654 | 2..603 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:45 Download gff for
FMO14261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7063439..7063505 | 2..69 | 94 | | Minus |
| 2R | 7062583..7062781 | 397..606 | 91 | <- | Minus |
| 2R | 7062965..7063117 | 244..396 | 100 | <- | Minus |
| 2R | 7063195..7063368 | 70..243 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:11:59 Download gff for
FMO14261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2950088..2950286 | 397..606 | 91 | <- | Minus |
| arm_2R | 2950470..2950622 | 244..396 | 100 | <- | Minus |
| arm_2R | 2950700..2950873 | 70..243 | 100 | <- | Minus |
| arm_2R | 2950944..2951010 | 2..69 | 94 | | Minus |
