FMO14263.5prime Sequence
417 bp (417 high quality bases) assembled on 2014-07-25
> FMO14263.5prime
TCAGTCGACATGCAGATAACAATCAAGGTGCTGAAGGGCAAGGACTGCAC
CATCGAGGTGGCGCCGACATCGACGATTCTGGAGGTGAAACACCAGATCG
AGGCGGAACTGCAGATATCGGCTACAAATCAAAAGCTACTGCTGTTGGGG
CGACCGCTTAACAATGAACAGACAATTGCGTCATATCCCAACATCAAGGA
GGGCACCAAACTCAATCTGGTGGTGATAAAGCCCTGTTTAAGGGACAGCA
TCCTGCGGGGATTCCGCAAGCACTATTCGGAGCCCCTAGCTGAGCGTATG
ACCAATGAGTTTATGGCCGACTTCGAGCGGAAAATCAACGAGCAGAGCCT
GGACGACCTGGAGAGACTGGCGGACAGCATAGTCAACAGAGCGGCCACAG
CAAGCTTTCTAGACCAT
FMO14263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:30:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7215-RB | 635 | CG7215-RB | 96..485 | 10..399 | 1950 | 100 | Plus |
| CG7215-RA | 1449 | CG7215-RA | 96..485 | 10..399 | 1950 | 100 | Plus |
| Prx5-RA | 1449 | CG7217-RA | 96..485 | 10..399 | 1950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18166730..18167073 | 399..56 | 1720 | 100 | Minus |
| 3R | 32079331 | 3R | 18167129..18167178 | 59..10 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:30:42 has no hits.
FMO14263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:01 Download gff for
FMO14263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7215-RA | 88..489 | 2..405 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:47 Download gff for
FMO14263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prx5-RA | 88..489 | 2..405 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:47 Download gff for
FMO14263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18166726..18167071 | 58..405 | 99 | <- | Minus |
| 3R | 18167131..18167186 | 2..57 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:01 Download gff for
FMO14263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13992448..13992793 | 58..405 | 99 | <- | Minus |
| arm_3R | 13992853..13992908 | 2..57 | 92 | | Minus |
