FMO14264.5prime Sequence
763 bp (763 high quality bases) assembled on 2014-07-25
> FMO14264.5prime
TCAGTCGACATGAGGCTGTTTGCGGCAGCAACAGTTGCGCTTGTATTGCT
TCTGGGCCAAGCAGCTGGCGAGGAGCTTGCGGAGGAGCGAGCGGGACAGG
CACAGGGCGATGCGGAGAGCACGGAATCTTCAGAAACAACAACGGACCAG
GCGGTGAGTGAGCCCCCGATCACGCTGGTCCACGTTCTGAATCCCGGCGA
GCGGGAGTATTTGTCACCCAACCTGATTGGTGTCCAGAACATTGCGATGA
CCTTCCTGCCACTGTCGATGAACTTTGTGAATATCATCGACGCCTTTCGG
GAAATCACCGCCGGAGTGCGCTATGAGATCCTGCTAAACGCGCTAGACAC
AAAGGCAATACAGCCGGCGGAAGCGGACATAGTCTGCCGCCTGGTCATCC
TGGAAAAGCCTTGGCTGCGCACCCAGTGGGGCGACAAGCACCGCGAACTG
GTTACCTCCAATTGCACCGACCCAGCGGTGAAACTCGGTGGCCGGAGATC
CCGGCAGAGAAGGCGCGACTGCTTAACGAGAAATATGTGAGTAATAGCAT
CTTTTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAAT
CTGGAGTCACAGATACTCACTAACCTGGGACCTATGAGGCGGAAGGTCAG
TTCTGACCAATACCCGCTTTCAGCGGCTCCTGTTCGTGCAACCTTCTCCT
GCTGCTTCTTTCTCCTGCCGAGGCTGCCCCTCTGGATTCGGCAGCTTCCT
GCTGTATTAAACC
FMO14264.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12163-RC | 1425 | CG12163-RC | 213..956 | 8..760 | 3510 | 98.5 | Plus |
| CG12163-RA | 2299 | CG12163-RA | 213..741 | 8..538 | 2605 | 99.6 | Plus |
| CG12163-RB | 1882 | CG12163-RB | 213..322 | 8..117 | 550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5243621..5244256 | 760..116 | 2750 | 98 | Minus |
| 3R | 32079331 | 3R | 5251424..5251533 | 117..8 | 550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:30:44 has no hits.
FMO14264.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:03 Download gff for
FMO14264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12163-RC | 213..958 | 8..763 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:49 Download gff for
FMO14264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12163-RC | 213..958 | 8..763 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:49 Download gff for
FMO14264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5243619..5244254 | 118..763 | 98 | <- | Minus |
| 3R | 5251424..5251533 | 8..117 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:03 Download gff for
FMO14264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1069341..1069976 | 118..763 | 98 | <- | Minus |
| arm_3R | 1077146..1077255 | 8..117 | 100 | | Minus |
