FMO14267.5prime Sequence
804 bp (804 high quality bases) assembled on 2014-07-25
> FMO14267.5prime
TCAGTCGACATGATGGCATCTCAGGATCAAGGTTCCTCAAGTAGGAACGA
CTTCGATTCTTCTGCTAAAGGAGGAAGCGGCGTCGAACAGGAATTGGCTA
CGAAAATGTTGCAAATACAATCTAAACGATTTTATTTGGATGTAAAACAA
AATAGAAGAGGCCGTTTTATAAAGGTTGCTGAGATTGGCGCTGATGGTAG
ACGAAGTCAAATTTACTTGGCTCTTTCAACTGCAGCCGAATTTCGTGACC
ATTTATCCTCATTTAGCGATTACTACGCTTCTCTAGGTCCACCAAACACC
GACAATTTGCCGGAAGATGGTAAACTTAAATCTGAAATGATGATAAAAGA
TTACAGAAGGTATTACTTGGACTTAAAAGAAAATGCGCGTGGCCGATTTT
TACGGGTATCGCAAACAATAACAAGAGGGGGGCCTAGATCTCAAATCGCT
TTACCGGCTCAAGGCATGATCGAGTTTCGTGACGCTCTTACAGATTTGTT
AGAAGAGTTTGGAGCTAATGATGGAGGGTTTAAAGGAGATTTACCGGAAG
AGCGACACATGAAGGTGGATAATAAAAATTTTTATTTTGATATCGGACAA
AATAATCGAGGAGTGTACATGCGGATAAGCGAAGTGAAAAATAACTTCCG
GACTTCGATAACTATTCCAGAGAAATGTTGGATTCGCTTTCGAGATATTT
TTAATGATTATTGCGAGAAAATGAAAAAATCGTCCGACTCAATTACTGCC
GAAATTAACTTACCTACATCTTCAAATAGTCTTAAAGCAAGCTTTCTAGA
CCAT
FMO14267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pur-alpha-RG | 2544 | CG1507-RG | 257..1040 | 3..786 | 3890 | 99.7 | Plus |
| Pur-alpha-RD | 2547 | CG1507-RD | 257..1043 | 3..786 | 3850 | 99.4 | Plus |
| Pur-alpha-RE | 2719 | CG1507-RE | 460..1215 | 31..786 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 565601..565753 | 634..786 | 765 | 100 | Plus |
| 4 | 1348131 | 4 | 564540..564664 | 405..529 | 625 | 100 | Plus |
| 4 | 1348131 | 4 | 564359..564482 | 285..408 | 620 | 100 | Plus |
| 4 | 1348131 | 4 | 560469..560583 | 69..183 | 575 | 100 | Plus |
| 4 | 1348131 | 4 | 565409..565517 | 527..635 | 545 | 100 | Plus |
| 4 | 1348131 | 4 | 560716..560822 | 182..288 | 535 | 100 | Plus |
| 4 | 1348131 | 4 | 560372..560412 | 31..71 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:30:59 has no hits.
FMO14267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:08 Download gff for
FMO14267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pur-alpha-RG | 255..1043 | 1..790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:08:56 Download gff for
FMO14267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pur-alpha-RG | 255..1043 | 1..790 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:08:56 Download gff for
FMO14267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 560372..560411 | 31..70 | 100 | -> | Plus |
| 4 | 560471..560583 | 71..183 | 100 | -> | Plus |
| 4 | 560718..560820 | 184..286 | 100 | -> | Plus |
| 4 | 564361..564479 | 287..405 | 100 | -> | Plus |
| 4 | 564541..564662 | 406..527 | 100 | -> | Plus |
| 4 | 565410..565515 | 528..633 | 100 | -> | Plus |
| 4 | 565601..565752 | 634..785 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:08 Download gff for
FMO14267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 586036..586141 | 528..633 | 100 | -> | Plus |
| arm_4 | 586227..586378 | 634..785 | 100 | -> | Plus |
| arm_4 | 580998..581037 | 31..70 | 100 | -> | Plus |
| arm_4 | 581097..581209 | 71..183 | 100 | -> | Plus |
| arm_4 | 581344..581446 | 184..286 | 100 | -> | Plus |
| arm_4 | 584987..585105 | 287..405 | 100 | -> | Plus |
| arm_4 | 585167..585288 | 406..527 | 100 | -> | Plus |
