FMO14269.5prime Sequence
943 bp (836 high quality bases) assembled on 2014-07-25
> FMO14269.5prime
TCAGTCGACATGAGCTTGCCAACCGACGGTCTAAACATGGAGATCACCCC
AAGCCCCACCCTGGCTGCCACGAGTCGCGGCGACTTGGAAAAAGTGCTGG
CTATGCTGGTCCTCGGACTCGGGAGTCTTTTGTTCGGATTGCTGCCCGCC
TTTATATCGGAACGGAATCGTCGCCGCTTCCCGCTGACCGCATCCCTGCT
CCTGTGCTTCGGAGCGGGCATTCTGCTAGCCACCGCACTGGTGCACATTC
TGCCCGAGGTGCGCGAACAAATGGACTCGAAATTCGCTGAGGTTGCCATG
TGCGGCGGGTTCTTCATCATCTACTTTATCGACGAGTTCATACACTACTT
CTTTGGCGAGGCCATTCAGCACACTCATGCCCACGATGCAGAGACTCCAG
CAACCGAGCCACCAAGACGTCCCACTAATGACAATGGTTATGGCGCAGTG
GACGAACGAGCGCCCCTTTTATCAGCGGAACCCAATACGTCACATGGGCA
TTCGCACCATCATAGCCACGATCATGACCACAATCACCCGGCCAGCGCAT
CTGGCTGTAATGATGCCAGTGTAGAGGACGCCAACGCCCGCATCTGCCAC
ACCAGCCACACGGAACCCTGCGCCCAATCCATGACAGGCACTCTGGGTCT
CTTTGTCGCCCTGTCACTGCACTCGGCCATCGAAGGACTCGCCATCGGCG
TTCAGAACTCTTCCACAAAGGTTCTGTTTCTTCTAGGGCGTCGCTGCACA
GTTCGTGATGGGCTTTTGTCTGGGGCTCGAGTCCGCTCGAATCGCAGACG
AGTTTCGCGCCAGTCGTCGCATTTCGTGTTGCCTGGGCGCGTCATGCATG
GCCTGGCATGCTTATTCGTGACGTGGCCAGGCCGCTGAGATTCCCAAGCA
AACTCATTGAGCTAATCGTCAGACTCTGACCGGAGCACACTCC
FMO14269.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip88E-RB | 1539 | CG4334-RB | 102..986 | 10..875 | 3925 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15269079..15269340 | 257..518 | 1310 | 100 | Plus |
| 3R | 32079331 | 3R | 15268763..15269013 | 10..260 | 1255 | 100 | Plus |
| 3R | 32079331 | 3R | 15269404..15269607 | 519..722 | 1020 | 100 | Plus |
| 3R | 32079331 | 3R | 15269771..15269828 | 750..805 | 190 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:31:05 has no hits.
FMO14269.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:11 Download gff for
FMO14269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4334-RB | 91..934 | 2..830 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:02 Download gff for
FMO14269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip88E-RB | 91..934 | 2..830 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:02 Download gff for
FMO14269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15268752..15269011 | 2..258 | 98 | -> | Plus |
| 3R | 15269081..15269340 | 259..518 | 100 | -> | Plus |
| 3R | 15269404..15269605 | 519..720 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:11 Download gff for
FMO14269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11094803..11095062 | 259..518 | 100 | -> | Plus |
| arm_3R | 11094474..11094733 | 2..258 | 98 | -> | Plus |
| arm_3R | 11095126..11095327 | 519..720 | 100 | -> | Plus |
