FMO14273.5prime Sequence
835 bp (582 high quality bases) assembled on 2014-07-25
> FMO14273.5prime
TCAGTCGACATGAATACTACCGCCAAGGTGTTCGTCGGCAGCCTGCCGCG
CTGCAAGCCGGAGGAGCTGCGTCGACTGTTCACCAACTATGGATCGGTCG
TTGAGTGCGACGTGATGAATCGCTGCGCCTTCGTCCATCTGGAGAACACG
GACATGGCGGAGGCGGCCATCGCAGCGCTGAATGGCACCATCTTCAAGGG
CCAGCCCATTGTGGTGGAGGCGGGCAGGCCAAAGTACGGCCCGGGAGGTG
GCAGTCGAGGTCAGCCGGGCTCTGGGGACAATCCGGGGCGCAGGCCCTCG
CAGGTTCAAGGTGGCGGGGCGGACAAGAGACCTCATGAATCCAATACCAA
CTTCAAGCGCAACTTTCGTGAGGAAGTCGGTGGCAGATTCTCCAACGAAG
GCCCAAGGAGCTCGAACTCCTCGGCCGCCAAATTTGGTCCCGTGAGAAAC
GAGTCTAACTACAGACAACAGCGCAGTGCTCCATACTCGAAAGGACCACC
GAACAATGAGTCTTCCAATCAGGGACAGGGCTTTAGGAACAAATTTGCAG
GCGGAGGCAAGTTTCGGTGGAAGCGCGGGCAACGAGGGACGCTTCGGCAG
CAATCGGTTTCAGCAGCGGGACAACAGTTGGACCACAGCCTGGCAGAAGA
AACTTTAAGAACAGTCCAACCAGCGGATATTAGGGGAGGAGGCAATATAG
TGACTTTCAAGGAGCAGCTCCAGCAGCGGGGGGAGGAGGATCCGTAATCA
GAGGGTCGGCGGCGGCGCCCAGGTTCAAGCCATGTGCGACAGATCGACGT
GAATTGCCTGCTGTAGAGCATCAACAGCAGCAATG
FMO14273.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:31:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7903-RA | 1515 | CG7903-RA | 72..901 | 8..833 | 3780 | 97.8 | Plus |
| CG7903-RB | 1509 | CG7903-RB | 72..895 | 8..833 | 3680 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:31:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29994207..29994740 | 833..304 | 2020 | 96.5 | Minus |
| 3R | 32079331 | 3R | 29994793..29995078 | 304..19 | 1430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:31:18 has no hits.
FMO14273.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-25 10:12:18 Download gff for
FMO14273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7903-RA | 67..904 | 1..835 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:09:10 Download gff for
FMO14273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7903-RA | 67..904 | 1..835 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:09:10 Download gff for
FMO14273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29994204..29994739 | 305..835 | 96 | <- | Minus |
| 3R | 29994793..29995078 | 19..304 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-25 10:12:18 Download gff for
FMO14273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25819926..25820461 | 305..835 | 96 | <- | Minus |
| arm_3R | 25820515..25820800 | 19..304 | 100 | | Minus |
